Gene Lferr_2313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2313 
Symbol 
ID6878307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2287698 
End bp2288492 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content64% 
IMG OID642790172 
Producthypothetical protein 
Protein accessionYP_002220721 
Protein GI198284400 
COG category 
COG ID 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.8827 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGAAC GGTTCGGCGT GGTTTTTTCC AGGGACCGGT TGACCTTGTG GCTGATCGGC 
GCGGCGGCCT GCGTCGCCTC GCTCACCTTT CTAATCTATC GCACCATCCG TCATGAGGTC
ACCAGGACCG TTGCGGCACC CTCGGCCTTC CGTATGGTCA GGATGCCGCC GTCGCCTCCG
GCTCCCGTCG CGACGGTGCC TCCGGCAAAA ATGGCCCCTG TCGACCTGCA TGGAAAGGCA
TCCCGGCCGT TGTCCGGTGG TCCCTCCGCC CGCCAGGCCG GGACGCATCC GGCAAAACAT
GGTCTGCCAA AGCCCCCGCC CTCCCGGCCA GTAGCGTCGC CGGCCATGAC TCATGCGGCC
TATCTACCGC CGGCATGGAC GGTTTCCACG CCCCATAAGG CGAATCTCAT CAGCCGTTAC
GTGACGTACT GGATACGGCA GGTGGAGAGT ACGGGCGCGC GCGAGGGGCC CATAGAAAGA
GGGGGCGAGA TCCAGGTGCG GGTTACCGTA TTCCGCAACG GCAATCTGGC GCAGTTGTCC
GTGGTCCGGT CGACCCTGCC GGCCAGCGCA TCCAGTAAAG CGGTTCGCAT GATCCGCACG
GCTTCTCCGT TCGCCCCTTT CCCCGAGGAT CTGGCCCGGC AGGCCAATAA ACTGGTAATC
CGTTGTACGA TGAACTTCCT GAACGGCGAT GTCGGAGCCC AATCTCGGCC CTCTGCGTCG
GGCGGCGCAG GCATCATGCC CACCCAAGGA TTGTCAGGGA GCTTATCCCA GGCCTTGTTG
GGTTCCGATT CCTGA
 
Protein sequence
MLERFGVVFS RDRLTLWLIG AAACVASLTF LIYRTIRHEV TRTVAAPSAF RMVRMPPSPP 
APVATVPPAK MAPVDLHGKA SRPLSGGPSA RQAGTHPAKH GLPKPPPSRP VASPAMTHAA
YLPPAWTVST PHKANLISRY VTYWIRQVES TGAREGPIER GGEIQVRVTV FRNGNLAQLS
VVRSTLPASA SSKAVRMIRT ASPFAPFPED LARQANKLVI RCTMNFLNGD VGAQSRPSAS
GGAGIMPTQG LSGSLSQALL GSDS