Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2313 |
Symbol | |
ID | 6878307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 2287698 |
End bp | 2288492 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642790172 |
Product | hypothetical protein |
Protein accession | YP_002220721 |
Protein GI | 198284400 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.8827 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGAAC GGTTCGGCGT GGTTTTTTCC AGGGACCGGT TGACCTTGTG GCTGATCGGC GCGGCGGCCT GCGTCGCCTC GCTCACCTTT CTAATCTATC GCACCATCCG TCATGAGGTC ACCAGGACCG TTGCGGCACC CTCGGCCTTC CGTATGGTCA GGATGCCGCC GTCGCCTCCG GCTCCCGTCG CGACGGTGCC TCCGGCAAAA ATGGCCCCTG TCGACCTGCA TGGAAAGGCA TCCCGGCCGT TGTCCGGTGG TCCCTCCGCC CGCCAGGCCG GGACGCATCC GGCAAAACAT GGTCTGCCAA AGCCCCCGCC CTCCCGGCCA GTAGCGTCGC CGGCCATGAC TCATGCGGCC TATCTACCGC CGGCATGGAC GGTTTCCACG CCCCATAAGG CGAATCTCAT CAGCCGTTAC GTGACGTACT GGATACGGCA GGTGGAGAGT ACGGGCGCGC GCGAGGGGCC CATAGAAAGA GGGGGCGAGA TCCAGGTGCG GGTTACCGTA TTCCGCAACG GCAATCTGGC GCAGTTGTCC GTGGTCCGGT CGACCCTGCC GGCCAGCGCA TCCAGTAAAG CGGTTCGCAT GATCCGCACG GCTTCTCCGT TCGCCCCTTT CCCCGAGGAT CTGGCCCGGC AGGCCAATAA ACTGGTAATC CGTTGTACGA TGAACTTCCT GAACGGCGAT GTCGGAGCCC AATCTCGGCC CTCTGCGTCG GGCGGCGCAG GCATCATGCC CACCCAAGGA TTGTCAGGGA GCTTATCCCA GGCCTTGTTG GGTTCCGATT CCTGA
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Protein sequence | MLERFGVVFS RDRLTLWLIG AAACVASLTF LIYRTIRHEV TRTVAAPSAF RMVRMPPSPP APVATVPPAK MAPVDLHGKA SRPLSGGPSA RQAGTHPAKH GLPKPPPSRP VASPAMTHAA YLPPAWTVST PHKANLISRY VTYWIRQVES TGAREGPIER GGEIQVRVTV FRNGNLAQLS VVRSTLPASA SSKAVRMIRT ASPFAPFPED LARQANKLVI RCTMNFLNGD VGAQSRPSAS GGAGIMPTQG LSGSLSQALL GSDS
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