| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2270 |
|---|
| Symbol | |
|---|
| ID | 6878264 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | + |
|---|
| Start bp | 2245890 |
|---|
| End bp | 2246642 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642790130 |
|---|
| Product | beta-lactamase domain protein |
|---|
| Protein accession | YP_002220679 |
|---|
| Protein GI | 198284358 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0000000611229 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATCTTCC GTCAGCTCTT CGAAACAGAA TCCGCTACCT ATACCTATCT CTTCGGCTGT
ACCCAGACAG GGCAGGCAGT ACTCCTCGAT CCGGTGCTGG AGACCGTGGA GCGGGATCTG
CAAGTCCTGC ATGATCTCGG GCTGCGCCTG AGCTATACCC TGGAGACGCA TATCCATGCC
GACCATGTGA GTAGCGCCCG CAAGCTCAAG GCCCGCGTCG GCAGCCGGAT TGCAGGGCCG
GCCATGGATG GCCTGCCCTG CACCGATTTC GGGGTGGCCG AAGAACGGCC TCTGAGCCTG
GGTTCGCTCC ATTTTCAAGC CCTTTTTACC CCTGGACATA CCGATACCCA CCACGCTTAT
CTGGTGGTGG ACGGCGACAC TTGGCGGGTT TTCACCGGAG ATGCCCTGCT CATTGATGGC
TGCGGGCGCA CCGATTTCCA GAATGGCGAC GCCGCCACCC TGTACCGCTC CGTTCAGGAA
AAGCTGTTTG TCCTGCCCGA CGCCACCCTG GTTTATCCGG CCCATGATTA TCAGCACCGG
CATGTCTCGT CCATTGCCCA GGAAAAGGAG CGGAACCCGC GCCTGGCCGG CAAAAGCTCG
GCGGAGTTCC AGGCCATCAT GGCTGATCTG AAACTGGCCC ATCCGCAAAA GATGGCATAC
GCTGTCCCTG CCAATCTTGC CTGCGGGCAA TGTCCGGAGG ACATTCCAGA AACGCTCCGC
CGTCTTTGCG ACCCATCCTT CCAGGGAGGG TGA
|
|---|
| Protein sequence | MIFRQLFETE SATYTYLFGC TQTGQAVLLD PVLETVERDL QVLHDLGLRL SYTLETHIHA
DHVSSARKLK ARVGSRIAGP AMDGLPCTDF GVAEERPLSL GSLHFQALFT PGHTDTHHAY
LVVDGDTWRV FTGDALLIDG CGRTDFQNGD AATLYRSVQE KLFVLPDATL VYPAHDYQHR
HVSSIAQEKE RNPRLAGKSS AEFQAIMADL KLAHPQKMAY AVPANLACGQ CPEDIPETLR
RLCDPSFQGG
|
|---|
| |