Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2252 |
Symbol | |
ID | 6878245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 2227101 |
End bp | 2228384 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642790112 |
Product | NADH-quinone oxidoreductase, F subunit |
Protein accession | YP_002220662 |
Protein GI | 198284341 |
COG category | [C] Energy production and conversion |
COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0000522116 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTCGTTA ACGGTGTTAC GTTGCAGAAC CGTGGGTTGC CTGACTCCCA CCGCCTTTCG GTGTATGCGG GGACCGGCGG CTACGATGCA CTGCGCAGGG TGCTGCTGGA CTCCATGGCG CCGGATCAGA TCATCAGCGA GATAAAAAAA TCCGCACTGC GTGGCCGGGG GGGCGCCGGT TTCCCTACCG GGCTGAAGTG GAGTTTCATG CCCAAGGGCG TGACCGGTAC CAAATACCTG CTCTGCAATG CCGACGAGGG TGAACCCGGC ACCTGCAAAG ACCGGGACAT CATGCGTTAT GAACCCCATC GCCTGATCGA GGGCATGATT ATCGGTGCCT ACGCCATGGG GGCGAGTACC GGATATATTT TTATCCGCGG CGAGTTCGTG GAGCCGATCC ACATTGTGGA GGGGGCGCTG GAAGAGGCCT ACGCAAAGGG GTATCTGGGG CAGAATATCC TTGGCACCGA TTTCTCCTTC GATCTGTATG TACATCGGGG GGCGGGTGCG TATATTTGCG GTGAGGAAAC GGCGTTGATG GAGGCGTTGG AGGGGAAGAA AGGGCAGCCA CGTTTCAAGC CGCCATTCCC CGCCAGCTAT GGTCTCTATG GTCAGCCCAC CACCATCAAC AATGTGGAAA CCTTTGCTTC GGTGCCGAGC ATCATCGCCA AGGGCGGCGA GTGGTTCCTC AATCTGGGAA AACCCAACAA TGGTGGCACC AAGATCTTTT CGGTGACCGG CCACGTGCAG CGGCCGGGTA ACTACGAAGT TCCCATGGGT ACCCCTTTCA AAGAACTCCT GGAAATGGCC GGAGGGCTGC GACCGGGGCG TCAGCTCAAG GCGGTGATTC CCGGCGGCAC CAGTACTCCC ATGGTGGGAG GCGAGGCCAT GATGGCGGTC ACCATGGATT ATGACTCCAT CGCCAAGTCA GGATCCGCCC TTGGGGCGGG GTCGGTCATC GTCATCGACG ATAGTGTTTG CATTGTCAAG GTGGTGGAAC GCATCGCCCG TTTTTACATG CACGAGTCCT GTGGCCAATG TACCCCGTGC CGGGAGGGTA TGGGCTGGTT GTGGCGGGTG ATGCATCGTC TCGAAAATGG CCAGGGCCGC GAAGAAGACC TGCAACTGCT GCTGGATGTG GGATCACGCA TCGAGGGCCG CACCATCTGT GCCCTGGCGG ATGGTGGTGT GGCTCCGGTA GTCAGCTCTG TGCGCCTGTT TCGTGAAGAA TATGAATACC ACATTCGGCA TAAGCACTGT TTGGTGGATG GGGGGGCTGT CTGA
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Protein sequence | MFVNGVTLQN RGLPDSHRLS VYAGTGGYDA LRRVLLDSMA PDQIISEIKK SALRGRGGAG FPTGLKWSFM PKGVTGTKYL LCNADEGEPG TCKDRDIMRY EPHRLIEGMI IGAYAMGAST GYIFIRGEFV EPIHIVEGAL EEAYAKGYLG QNILGTDFSF DLYVHRGAGA YICGEETALM EALEGKKGQP RFKPPFPASY GLYGQPTTIN NVETFASVPS IIAKGGEWFL NLGKPNNGGT KIFSVTGHVQ RPGNYEVPMG TPFKELLEMA GGLRPGRQLK AVIPGGTSTP MVGGEAMMAV TMDYDSIAKS GSALGAGSVI VIDDSVCIVK VVERIARFYM HESCGQCTPC REGMGWLWRV MHRLENGQGR EEDLQLLLDV GSRIEGRTIC ALADGGVAPV VSSVRLFREE YEYHIRHKHC LVDGGAV
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