Gene Lferr_2215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2215 
Symbol 
ID6878206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2192813 
End bp2194165 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content59% 
IMG OID642790073 
Productprotein of unknown function DUF224 cysteine-rich region domain protein 
Protein accessionYP_002220625 
Protein GI198284304 
COG category[C] Energy production and conversion 
COG ID[COG2048] Heterodisulfide reductase, subunit B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.279584 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGACG ACAACAACAG CACGCAACAG GGCGTGGCAG GTCACGGCGC CTTTTTTCAG 
GACACGAATC TTTCGGCGAA TGAGGCGGAA ACGGCTACGG CCTGGGTGCG CAGCCATGTG
GACCGCCGCA GCGTCGATCT GGGCGAGCGC ATGGACGATA TCCGCGACCA TATGTGGGAA
CTGGAGAAGG AAGGCGAGAT CATCGTCCAT CGCATCAATC CCGAACATCG TGCGGAAACG
GTGCAGACCC TCTATGGTTG GGATAAAAAG ATCCCCACCA ACAACCTTTG GCACCACAAG
AGCTGCGGAC AGTGCGGCAA CATCCCCGGC TATCCCACCA GCCTCATGTG GTTCATGAAC
AAGCTGGGCA TCGACTACCT CGACGAGACC GACCAGACCT CCTGCACCGC CTGGAACTAC
CATGGCTCCG GCATCGGCAA TGTGGAGTCC CTGGCCGCCG TCTTCCTGCG CAACTTCCAT
CAGGCCTACG TCTCCGGCAA GCAGCACGGC TTCGAGAACG GCCACTTCTT CCCCTTGGTG
CACTGCGGCA CCTCCTTCGG CAACTACAAG GAGATCCGCA AATACCTCAT CGAGTCCGCC
GAACTGCGGG AGAAGGTCAA GAAGATCCTC GGCAAACTGG GCCGTCTGGT GGACGGCAAG
ATCGTCATCC CCGAGGAAGT GGTCCACTAC AGCGAATGGC TGCACGTCAT GCGCAACCGC
ATCGCCAGCG AATTGCAGAC CATCGACATG AGCAACGTCC GGGTCACCGT CCATGCCGCC
TGCCACTATT ACAAGATGGT GCAGGAAGAC GCCGTCTACG ACAACACGGT GCTGGGCGGT
AATCGTACCG CTGTCGGCAC CTCTGTCGCC CAGGCGCTGG GTGCCCAGGT CATCGACTAC
TCCACCTGGT ATGACTGCTG TGGCTTCGGG TTTCGGCACA TCATCTCGGA GCGCGAGTTC
ACCCGCAGCT TCTCCATGAA CCGCAAGATC AAGGTGGCGC GGGAGGAAGC CAGGGCCGAC
GTCATGATCG GCATCGACAC CGGCTGCATC ACCACCCTGG ACAAGAACCA GTGGATCGGC
AAGGCCCACG ACATGAACTA CAGTGTTCCC ATCATTGCCG ACGTCCAGCT CGCGGCCCTG
GCCTGTGGCG CCGATCCCTT CAAGATCGTG CAGTTGCAGT GGCATGCTTC GCCCTGTGAA
GATCTGGTGG AAAAGATGGG CATCAGTTGG GACAAGGCCA AGGCCGATTT CCAGGATTAT
CTCAAGCAGG TGGAACAGGG CAATGTGGAA TACCTCTACA ACCCTGAATT GGCCATCAAC
CAGAACATCA ATATGAAGAT GGCTTCCGCC TGA
 
Protein sequence
MKDDNNSTQQ GVAGHGAFFQ DTNLSANEAE TATAWVRSHV DRRSVDLGER MDDIRDHMWE 
LEKEGEIIVH RINPEHRAET VQTLYGWDKK IPTNNLWHHK SCGQCGNIPG YPTSLMWFMN
KLGIDYLDET DQTSCTAWNY HGSGIGNVES LAAVFLRNFH QAYVSGKQHG FENGHFFPLV
HCGTSFGNYK EIRKYLIESA ELREKVKKIL GKLGRLVDGK IVIPEEVVHY SEWLHVMRNR
IASELQTIDM SNVRVTVHAA CHYYKMVQED AVYDNTVLGG NRTAVGTSVA QALGAQVIDY
STWYDCCGFG FRHIISEREF TRSFSMNRKI KVAREEARAD VMIGIDTGCI TTLDKNQWIG
KAHDMNYSVP IIADVQLAAL ACGADPFKIV QLQWHASPCE DLVEKMGISW DKAKADFQDY
LKQVEQGNVE YLYNPELAIN QNINMKMASA