Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_2200 |
Symbol | |
ID | 6878191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 2179315 |
End bp | 2180268 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642790058 |
Product | lipoyl synthase |
Protein accession | YP_002220610 |
Protein GI | 198284289 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0320] Lipoate synthase |
TIGRFAM ID | [TIGR00510] lipoate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.810557 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0342252 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTCCC AACCCCAAAG CAAAAAAGCG GCTCGTGGTG CCGACAAAAC CGCACGCAAC CCCATACCCA TCATTCCGGC ACCTACAGAA CGCCTCCCCA AACCACAGTG GTTGCGGGTA CGATCGCCCT TATCCCCCGA AGTGGACCAA CTCAAAAAGA TCCTGCGTGA TGCGGCTCTC CATACGGTCT GTGAAGAAGC CTCCTGCCCG AATCTGGGAG AATGCTTTGG CGGTGGAACG GCGACCTTCA TGATCCTGGG AGATATCTGC ACCCGCCGCT GCCCCTTCTG TGATGTGGCG CATGGCCGCC CAGAAGCACC CGATCCCCTG GAGTCCGTTC ATCTTGCCCG GACCGTGGCC AGCATGAAAT TACGTTTTGT CGTCATCACC TCCGTCGATC GTGATGATCT GCGTGACGGA GGTGCCCGTC ATTTTGCAGA AGTCATTTCG GCACTGCGCG AACATTGCCC GGAACTGCAC GTGGAAATTC TCGTACCGGA TTTTCGCGGT CGGGTGGCAA ATGCCCTGGC CGCATTTCGG GAGACCCCTC CCGATGTATT CAATCACAAC CTGGAAACCG TGCCGCGCCT GTACCTACAG GCCAGGCCGG GTGCAGATTA CCATCACTCG CTGCAACTGC TCGCCGCCTT CAAGGCACAG CATCCGCAGA TCCCCACCAA ATCCGGGCTG ATGCTTGGTC TGGGCGAGGA AATCGATGAA ATCCGCGGGG TGATGCGCGA TCTGCGGCAG GCGGGATGTG AATTGCTGAC CATCGGGCAG TATCTGGCAC CATCCCGCCA TCATCTGCCG GTGGCGCGCT TTGTTCCGCC AGAAGAATTC CAGCAGTTGC AGCGGGATGG CATGGCCATG GGATTCCGCC ACGTCGCCAG CGGCCCGCTG GTGCGATCTT CCTATCATGC CGAGCGTAGT TTTCATGAAA TAGGTGGCGA CTGA
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Protein sequence | MDSQPQSKKA ARGADKTARN PIPIIPAPTE RLPKPQWLRV RSPLSPEVDQ LKKILRDAAL HTVCEEASCP NLGECFGGGT ATFMILGDIC TRRCPFCDVA HGRPEAPDPL ESVHLARTVA SMKLRFVVIT SVDRDDLRDG GARHFAEVIS ALREHCPELH VEILVPDFRG RVANALAAFR ETPPDVFNHN LETVPRLYLQ ARPGADYHHS LQLLAAFKAQ HPQIPTKSGL MLGLGEEIDE IRGVMRDLRQ AGCELLTIGQ YLAPSRHHLP VARFVPPEEF QQLQRDGMAM GFRHVASGPL VRSSYHAERS FHEIGGD
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