| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_2108 |
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| Symbol | |
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| ID | 6878099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 2102733 |
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| End bp | 2104811 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642789971 |
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| Product | Glucan 1,4-alpha-glucosidase |
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| Protein accession | YP_002220523 |
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| Protein GI | 198284202 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | [TIGR01535] glucan 1,4-alpha-glucosidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.860324 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGGCATG AACGTCGCAA GACCAAGGAG ACCATGAGCG AACTTCCGTT CGGGCAGCCA
GGCCTGCCCA GCACTTGGGC CAGTGCCCAC AAGCAGGCTG TGGGCACTGC CTTGAGTGAA
CGTTCCCGCG TCTGGTTCAC CGTCGCCGAC GGTGTGTTAA CCGAGGTTTA TCATCCGACG
ATCGACTGTC CGAATCAACG CGATCTTCAG TTCCTGATCA CCGATGGTGG TGAGCTATTT
CACGAAGAGC GACGCGATCT GGAACATAGC GTCGAGTGGA TCGAAGACGG CATTCCGGCC
TTCCAGATTG TCAGCCGAGA TCCGCAAGGC CGCTACCGAC TGATCAAGAC GGTCTGCACG
GATCCCGATG CCGACTGCGT GCTTGAGCGA GTCCACTTCG AGCCTTTGGT GGAAGCAGCC
CGACATTACC GCCTGTATCT GCTGTGGGCG CCCCATCTCG ACAACCAGGG GTCGGATAAC
CACGGTCGCG TTGAATATGG CGCCAACGAA TGCGACTGGC TCATCGCCTG GCGCGGGTCT
CGATACGCTG CGGTAACCGC CACGGTACCC TTCTCACGCA TGTCAGCCGG CTATGTGGGT
CATTCCGACG GCTGGCAGGA TATAAACAGA CACCGGCACC TAGAATGGAA CTTCACGACA
GCGGGACCGG GCAATATTGC GCTGACGGCA GAACTGGAGT TGCCGCCAGA CGGTCATTTC
ATGCTTTGTG TCGGGTTCGG CAACAGCGAG CGGACGGCCA TCAAGGCTGC AAGCGGCTGC
CTGGACCGCA ACGGATTCGC GTCGGTTCTC AATCGCTACA TGGAAGGGTG GCGCGCTTAT
CAGCGCGGAT TGCTCGATCT GTCGGCCCAG AGCGGCGACG GCGGGCAGCT TTACCGGCGT
AGCATCGCGG TGTTGCGTAC GCATATCGAC AAGATTCATC GCGGCGCGGG CGTGGCCTCG
TTGTCCATTC CCTGGGGCGA ATCGGCATCG GCGGACCAGC CGATTGGCGG CTATCACTTG
GTCTGGCCGC GCGATCTCTA CCACCAGGCC ATGGGCTTGC TCGCCGCCGG CGACCGGGAG
AGGCCAGCGC AGATTCTGCA TTATTTGTTC TCTCGACAGC GCGAGGATGG AAGCTTCTTT
CAGAATTTCT GGGTGGATGG CAGGCCCTAC TGGCAAGGCC TGCAGCTCGA CGAAGTCGGC
TATTCGGTGC TGTTGGCCAA CCACCTGCAC CACGAAGGGC TCTTGGACTT CGACCCGTAT
CCCGTGGTAC AGCGTGCCGC CGATTTCCTG GTGAACCATG GGCCGGTCAC CCCCCAGGAC
CGCTGGGAGG AGAACAGAGG TTACAGTCCC CATACCCTGG CGGTAGTGGT TGCCGCGCTG
CGCGCTGCGG CAGCGGTGGC CGATGCGACC GGAAAAGGGG CGCAGGCCGT CACTTACCGA
CAGGTGGCGC AAGACTGGGA ACAACGCATC GAGGATTGGA CCTTCACCGA TTGCGGTCGA
TTGCTCTTCG GCCATCCCGA GCACTACGAG CGTATCGCCC TGATCCCGTC GGTCGACACC
GGTGAGCATC TGCCAGAGTG TCGAGTATTT CTGCCAATTC GCAATCTACC AGCGGAAGCA
ATGTACAACC AGTCCCAATG TTGCGTGGTA GACGGCGGTT TCCTGGAGTT GGTACGCCTG
GGTCTGCGCA CCGCCGCCGA CCTGCACGTT CTCAAGACCC TGCCGGTATG GGATGCACTG
TGCCGACGCG AGACGCCTTG CGGACCGGCG TGGTATCGCT ACAACGGGGA TGGTTACGGT
GAGCACGAGG ACGGTTCACC ATTCGATGGT ACCGGGCGCG GACGCTTGTG GCCGTTGCTC
ACCGGCGAGC GCGGACACTA TGAAGTTGCC GCCGGACGCG ACTCCCGGCC CTACATCAAG
GCGCTGGAGT GCTTTGCCAA CGAAAACGGC ATGCTGCCCG AGCAAGTGTG GGATACAGAA
CCGCGTCTGG GCCATGGCAC GGGTTCGGCC ACACCTCTGG TGTGGGCTCA CGCGGAGTAT
ATCCGGCTGC TGGGCGCTTC GAGTCGTAAA GGAACATGA
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| Protein sequence | MRHERRKTKE TMSELPFGQP GLPSTWASAH KQAVGTALSE RSRVWFTVAD GVLTEVYHPT
IDCPNQRDLQ FLITDGGELF HEERRDLEHS VEWIEDGIPA FQIVSRDPQG RYRLIKTVCT
DPDADCVLER VHFEPLVEAA RHYRLYLLWA PHLDNQGSDN HGRVEYGANE CDWLIAWRGS
RYAAVTATVP FSRMSAGYVG HSDGWQDINR HRHLEWNFTT AGPGNIALTA ELELPPDGHF
MLCVGFGNSE RTAIKAASGC LDRNGFASVL NRYMEGWRAY QRGLLDLSAQ SGDGGQLYRR
SIAVLRTHID KIHRGAGVAS LSIPWGESAS ADQPIGGYHL VWPRDLYHQA MGLLAAGDRE
RPAQILHYLF SRQREDGSFF QNFWVDGRPY WQGLQLDEVG YSVLLANHLH HEGLLDFDPY
PVVQRAADFL VNHGPVTPQD RWEENRGYSP HTLAVVVAAL RAAAAVADAT GKGAQAVTYR
QVAQDWEQRI EDWTFTDCGR LLFGHPEHYE RIALIPSVDT GEHLPECRVF LPIRNLPAEA
MYNQSQCCVV DGGFLELVRL GLRTAADLHV LKTLPVWDAL CRRETPCGPA WYRYNGDGYG
EHEDGSPFDG TGRGRLWPLL TGERGHYEVA AGRDSRPYIK ALECFANENG MLPEQVWDTE
PRLGHGTGSA TPLVWAHAEY IRLLGASSRK GT
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