| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1945 |
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| Symbol | |
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| ID | 6877930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 1936556 |
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| End bp | 1938772 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642789813 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_002220371 |
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| Protein GI | 198284050 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACACA TCGTGACACC ACGCGCCATC GTCAAGGCCA TCCTGGCCGC CACCTTCATC
GGCCCCGTTC CGGCCCTTGC CGATGATCCG GTCAAAACCG ACGATATTTC GGTATTCGGC
CAGAAGGAAA CGCGGCAGGT CCTGACCATG ACCCGTTCGG AACTCAGTGA GGCCCCGCCG
GGATATAGCC CCCTGGCCTC CCTGCAGAAG CTGCCCGGCG TATTCTTTTC CTCATCAGAC
CCCCTCGGCA ACTACGAATG GGGCAGCCGC TTCAGTATCC GGGGTTTCAA CCAGAACCAG
CTCGGTTTCA CGCTGGATGG ATTACCATTG GGCGATCAGA GCTACAGCAA CAACAACGGC
CTTTCCATCG GGCGCGCCAT CAGCCAGGAA AACATCAGCC GGGTCAGCGT ATCCGAAGGG
GCCAGCGATA CCGGCACGGC ATCCACCAGC AACCTGGGCG GCAGCGTTCA GTTCTTTTCC
GTCGATCCCA AGAATCGCTT CGGCGTGACC CTGGCCGAGA CCTATGGCAG CGCCAACTCC
AGCCGCACCT TTCTGCGCCT GGATACCGGC GACTTGGGTG CCCATACCAA GGCCTTCGTC
AGCCTCCTCT ATAGCCGCGC CGACAAATGG AAAGGCTATG GCCCGCAAAG CGAAAAACAA
CTCAACGCCA AGATCGTACA CTTCTTCGGT GAGAGCAAGA TCACGGCTTT TGTCGATCTA
TCCCGCCGTG ATGAAAGCGA CTACGCCGAT CTCTCCCTCG ACTCCCAGCG GCGCCTGGGC
TGGAACTGGG ACAATTATGC CCCGGATTTT CAGCGCGCCG CCAACGCCGC CAAAGGTATC
TTTACCGGCG GCGTGACCAG CGTTGACGAT GCCTATTATT TCGCCCGAGG CCTGCGCAAC
GACGAACTGG CTTATATGAA CGCCAATCTC AAGCTCTCCG CCATAGCCCG TCTCGATACC
ACCGTCTATT ATCACCACAA TGATGGGCAA GGGCATTGGT ATACCCCTTA TGTGCCCTCC
CCATCGGGCC TGCCCATATC CATCCGCACC ACGGAATATG GCATCAGCCG GGGCGGCGTC
ATCTCTTCGC TGGTGGCGCG GCTCCACCAT CACCGACTCA GCACCGGATT CTGGTATGAA
TACAATAAAC ATCAGCTTAC CCGGAATTAC TACAATATCA CCTCCGGTGA CATCAATGCC
TACGATCATT TTCTCAGCAA CCCCATTGCC ACGGCTTTCT TGCAGCAGTT CGACACCACT
ACCTGGCAAT TCTTCGCCCA GGATCAGGCC ACCTTCTTCA ATGACCGGCT AAAAGTAACC
CTGGGCGTCA AAAGCCCCCA TGTGAACATT GATGCCAACT CCCTGGTGGG CAATCTCGCC
GCCGGTTCCA TCAGCGCTCA GCGCGGCCTC CTGCCGCAGG TGGGCCTGAA TTACCAGCTC
ACCCCGGCGG AGAATGTTTT CTTCTCCTAC GCCCAGAACA TGCGCGCCTT TCAGCCGGGC
ATTAGTGGAC CGTTCTCCAC CACGCAGGCC GCTTTCAACG CCACCTCCGG CAGCCTAAAA
CCGGAAACTT CCCAGACCGT GGATATCGGC ATCAAGACCC AGCGGGGCAA TTTCCAGGCG
TCGCTGGATG CGTATCTGGT CAACTTTGAT AACCGCTTGC TGAGCATCTC CCAGTGTGTG
GGCATTCTCG GCTGCCCCTC CACCCTGGCC AACGTAGGCT CCGTGCATAC CCGCGGCGTG
GAAGGCGCCT TTCAATGGTC GCCCGTCCAG GATGTCACCT GGTACAATTC CTTGACTTAT
ACCTCTTCCA AGTACCAGTC CGACTATCTG GACGGCACGA CCCTGGTACG GGCCGCGGGT
AAAAATGTCG TGGATGCCCC GCGCCTGATG TTTGCCACCC AGCTTGCCTA TGAACACGCC
GGTTTCTTCG GCCGCCTCGG TGCAAAATAT ACGGGTGAGC GCTATTACAC CTACACCAAT
GACGCCAAAG TGCCGGGCTA CTGGCTGACA GACCTCAGCA CCGGCTACCG CCTGCGCCGC
GTCCTCGGAC TCCAGGAACT GCGCTTCCAG CTGAACGTCA CCAACCTCCT CAACGAAAAC
TACTGGGCCA CCATCGGTAC CAACGGCTTT GTCTCCTCGG ATCCGCAGGG ACAGTTCTGG
ACCCTGCAAA ACGGCGCGCC ACGCCAGGTC TTCGGTACGG TGAGCGGCAC CTTCTGA
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| Protein sequence | MKHIVTPRAI VKAILAATFI GPVPALADDP VKTDDISVFG QKETRQVLTM TRSELSEAPP
GYSPLASLQK LPGVFFSSSD PLGNYEWGSR FSIRGFNQNQ LGFTLDGLPL GDQSYSNNNG
LSIGRAISQE NISRVSVSEG ASDTGTASTS NLGGSVQFFS VDPKNRFGVT LAETYGSANS
SRTFLRLDTG DLGAHTKAFV SLLYSRADKW KGYGPQSEKQ LNAKIVHFFG ESKITAFVDL
SRRDESDYAD LSLDSQRRLG WNWDNYAPDF QRAANAAKGI FTGGVTSVDD AYYFARGLRN
DELAYMNANL KLSAIARLDT TVYYHHNDGQ GHWYTPYVPS PSGLPISIRT TEYGISRGGV
ISSLVARLHH HRLSTGFWYE YNKHQLTRNY YNITSGDINA YDHFLSNPIA TAFLQQFDTT
TWQFFAQDQA TFFNDRLKVT LGVKSPHVNI DANSLVGNLA AGSISAQRGL LPQVGLNYQL
TPAENVFFSY AQNMRAFQPG ISGPFSTTQA AFNATSGSLK PETSQTVDIG IKTQRGNFQA
SLDAYLVNFD NRLLSISQCV GILGCPSTLA NVGSVHTRGV EGAFQWSPVQ DVTWYNSLTY
TSSKYQSDYL DGTTLVRAAG KNVVDAPRLM FATQLAYEHA GFFGRLGAKY TGERYYTYTN
DAKVPGYWLT DLSTGYRLRR VLGLQELRFQ LNVTNLLNEN YWATIGTNGF VSSDPQGQFW
TLQNGAPRQV FGTVSGTF
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