Gene Lferr_1904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1904 
Symbol 
ID6877889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1895321 
End bp1896076 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content63% 
IMG OID642789774 
Producthypothetical protein 
Protein accessionYP_002220332 
Protein GI198284011 
COG category 
COG ID 
TIGRFAM ID[TIGR02186] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTGG TAAACCTTTG CCTCATGGGT CTCGCCGCGC TGGTGACGGC ATGGGTGACA 
CCCGTGCTGG CGGCGGAACC TCTGGTGGTC GGCACCAGTA ACGACCTGGT GAAGGTCACC
AGCCATTTTA CGGGGCGGGA ACTGCTGGTT TACGGTGCGC TCTCCCAACC GGGGCAGGTG
ATTGTCCTGC TGCGCTCTCC CGCGGCTACC GAGGCCATGT CACGCAAAAC CCGGACTGGG
CCCATTTGGC TGACGGGCGC CAGGGTGACG GTGACAGGTG CCCCCGGTAT CTGGGAGATG
CTCTCCTCAG CGCCCGCAGA CCAGTTGCTC CCCTTGGCGA CCCGGCAGTT GCTGGGTCTG
GACCCCGGCC ATCTGTCCCG GCAGGCCAGC TATCAGCCGG AGCCGGCGGA CGTGGCTGCG
TGGCAGCAGG CTTTTCTCAA GAACAAACTG CGCCGTGGTG ATTATGTGGT GCAGTCGCAA
GGGGTGCATA TCGAGGGTGG ACAACTTTTT TCGGCCCGTA TGGCCCTGCC GGCTTCTCTG
CCTTTGGGGC GCTATACCCT GGATACTTTC CTGGTCCGTC ACGGTCAGGT GGTGGCCAGG
CAGGAACAAC ATATCGAGGT ACAACAGACC GGCTTCCAGG CCTGGATCGC CCGTTTCGCC
AGCCAGGATG GCTGGCTCTA CGGTATCGTA CTGACCCTGA CGCTGGCTGC CATGGGGCTC
GGCCTGGGTA TCGTCATGCA GCGGCGTCTG AACTGA
 
Protein sequence
MRLVNLCLMG LAALVTAWVT PVLAAEPLVV GTSNDLVKVT SHFTGRELLV YGALSQPGQV 
IVLLRSPAAT EAMSRKTRTG PIWLTGARVT VTGAPGIWEM LSSAPADQLL PLATRQLLGL
DPGHLSRQAS YQPEPADVAA WQQAFLKNKL RRGDYVVQSQ GVHIEGGQLF SARMALPASL
PLGRYTLDTF LVRHGQVVAR QEQHIEVQQT GFQAWIARFA SQDGWLYGIV LTLTLAAMGL
GLGIVMQRRL N