Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1877 |
Symbol | |
ID | 6877862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 1859316 |
End bp | 1861805 |
Gene Length | 2490 bp |
Protein Length | 829 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642789747 |
Product | Peptidoglycan glycosyltransferase |
Protein accession | YP_002220305 |
Protein GI | 198283984 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.907756 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCAAG CGAATACCCC GCGCGCGCGC TCCAGGCAAC CGAAGCGCCA CCATTATGGA CGCTGGATTT TACTGATCAT CCTGCTGATT CTGATCAATA TCGGGATCGG TGTCGGCATT TATGTCTACC GCATCTGGCA AACTCTACCG CCTGTCCACG AACTCAAGGA ATGGCATCCG GATGAACCCT TGCGGATATA CGCGGCGAAC GGCGCGCTGC TGCAGGAGGT CGGTCCTCAG ATGCGATATG CGCTGCCCCT CGACCAGATT CCGGCCCGGT TGCAGGAGGC CTTCATATCC GCTGAAAACG CTCGTTTCTA CAGTAACAAC CCGCTGTATT ATCCGGTCAG TTATCCCGGT ATTCTGCGTG CGGCGGCGGT GGACATCATT CATATGGCGC CGATGCAGGG TGCCAGCACC ATCCCGGAGC AGGTGGCCCG GAACTTTTAC CTGACTCCGC AAAAAACCAT TTCCCGGAAG ATCGCGGAAA TTCTCCTGGC ATACAAACTC GCCGCTCATT TTACCCATAA GCAGATTCTC GAGCTTTATC TGAACAAGAT TTATCTCGGG CAAGGGGCCT ACGGCGTGCA GGCAGCGGCC CGGACCTATT TCGGAAAAGG CGTCAGCGAA CTGACCCTGG GGGAGATGGC AACCATTGCC GGCCTACCAC CGGCGCCTTC GGTGTTGAAC CCCGTAGTGA ATCCCGATCT CGCCAGGAGG CGCCGCAGCT ATGTGCTCAA ACGCATGGAA AAGCTCGGCT ATATTTCTGC GGATGAGGAG GCGAAGGCCA ATGCGGAACC CATTCTCTCG CGCTATCATG CCGCCGCCAG CAATGGCGCG CCCTACGTCA CCGACTGGAT CGCCAGTTGG CTCACCCAGC AATTTGGCAG CGATTTCACT TACCGTTCCG GCCTCAAGGT GTATACCACC ATCGTGCCCA AAGATCAGGA AGCGGCGAAT GAGGCGATTG CCGTGGGCTT GGAGAACTAC GATATGGGGC TCTCCAGCAT GGACCCCAAA AGCTACCGCG GCCCCATCGC ACGTCTCAGC GGGGCTGCGC TACAGGCGGC TCTCGCCGGC AAGCGGCCTG ACCTATTGCC ACCACATGAC CCGGCCAACC TCAAATGGGG TGTAGTGGTG GGCGCCGACC CCAAAAGCGC CACGGTCTCT CTGGAAGGCA GAAAAAATGT CACGCTGACC CTGCGCGACG TCAACTGGGC ACGCCCCCGC GTGGGCGCAC CCATGCCGCG TACGGTAAAC GCGGTCCTGC ACAGCGGCGA CCTGATCTGG CTACGCCCTT ATGTCAACGC TGTCACGGCG GGGGCTGGCC AGGAATGGGG AGCCAATGTC TGGTCCTCGG CCGGGAAGAA CGCGGGCTGG CAGCTTTCAC AAATTCCCCA GGTACAGGGT GCCTTGGTCA GTCTGGACAG TCGCACCGGG GCCATCCACG CCTTGGTGGG CGGCTTCAGC TATGAACTCA GCCATTTCGA TCGCGCCGTG TTTGCCTACC GGCAACCCGG ATCGGGCTTC AAGCCGTTCG TCTACGCCGC GGCCATGGAT GCGCCGGCAC TGCTGGCTTC GGGCAAGAAC ACCTACATGA CGCCCCAGAC CCCGATTCCG GACACCCCCC TGTCCATCAC CCTGCCCACC GGCCAGGTCT ATGTACCGAC CAACTACAGT AACCAGTTCT CCAATACGCC GATCCCGGTA TGGTCGAACC TGGCTTACTC CCACAACGTG CCCAGTGTGC GTATCCTGAT GGATATCGGC ATTCCCTACG CGGCGCAGTA TGTGCAACGC TTTGGTTTTC CGGCAAAGCA GGTGCCTCAG GTGCCGTCCA TGGTGCTGGG CGCGGGGGAC TACAGCCCCC TGCAACTCGC TCGCGCCTAC GCGGTCTTCT CCAGTGGCGG TTTTTTGCCC AAGCCCTATC TCATCACCAG AATCGTGAAC AGTCGTGGCA CCCAGATCTC CCTGCTCAAC TGCCCCATGG GCTATACTCC GCCCCCCCAG CAGACGGCCA TACCCCCCGG GGTGGCCTAC CTGCTGACCG AAATGATGCA GCAAGTGATC AAAATCGGGA CCGGTGTCGC CGCCCAGAGC CTCGGGCGCA ATGACATCGC CGGCAAAACC GGCACGACCA ACCACGAAAA CAACGCCTGG TTCAACGGGT TTAGCCCGCG CATCACCACC AGCGTCTGGG TGGGCTACGA CGACAACCGC ACCATGGGCC GCTGGGCTGC GGGTGCGCGG GAGGCGTTGC CGATCTGGAT TCACTATATG CGGACGGCCA TGGCGGGCAG CCCGTCTACC GGATTCTTCC GGCCACCCTC GGTGACCGGC CCGACCATCA GCGGTGGCAG CAATGTCATC GGCGTCAGTG ATTATCTTGC AGGATATCCG CCCGTTGCCG CGCCCACGGC GTCAACGACA AGTGGCGCGG GAACGGATAT CGGCGACAGA CTGATGAACA CCATCAAGAG CCTTTTCTGA
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Protein sequence | MAQANTPRAR SRQPKRHHYG RWILLIILLI LINIGIGVGI YVYRIWQTLP PVHELKEWHP DEPLRIYAAN GALLQEVGPQ MRYALPLDQI PARLQEAFIS AENARFYSNN PLYYPVSYPG ILRAAAVDII HMAPMQGAST IPEQVARNFY LTPQKTISRK IAEILLAYKL AAHFTHKQIL ELYLNKIYLG QGAYGVQAAA RTYFGKGVSE LTLGEMATIA GLPPAPSVLN PVVNPDLARR RRSYVLKRME KLGYISADEE AKANAEPILS RYHAAASNGA PYVTDWIASW LTQQFGSDFT YRSGLKVYTT IVPKDQEAAN EAIAVGLENY DMGLSSMDPK SYRGPIARLS GAALQAALAG KRPDLLPPHD PANLKWGVVV GADPKSATVS LEGRKNVTLT LRDVNWARPR VGAPMPRTVN AVLHSGDLIW LRPYVNAVTA GAGQEWGANV WSSAGKNAGW QLSQIPQVQG ALVSLDSRTG AIHALVGGFS YELSHFDRAV FAYRQPGSGF KPFVYAAAMD APALLASGKN TYMTPQTPIP DTPLSITLPT GQVYVPTNYS NQFSNTPIPV WSNLAYSHNV PSVRILMDIG IPYAAQYVQR FGFPAKQVPQ VPSMVLGAGD YSPLQLARAY AVFSSGGFLP KPYLITRIVN SRGTQISLLN CPMGYTPPPQ QTAIPPGVAY LLTEMMQQVI KIGTGVAAQS LGRNDIAGKT GTTNHENNAW FNGFSPRITT SVWVGYDDNR TMGRWAAGAR EALPIWIHYM RTAMAGSPST GFFRPPSVTG PTISGGSNVI GVSDYLAGYP PVAAPTASTT SGAGTDIGDR LMNTIKSLF
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