Gene Lferr_1865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1865 
Symbol 
ID6877849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1846375 
End bp1847103 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content64% 
IMG OID642789734 
ProductCarboxymethylenebutenolidase 
Protein accessionYP_002220293 
Protein GI198283972 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.613212 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCAGA TCACCTCTGA ATGGGTTCAA CTGGAAAACG GCCCACGCGC CTGGTATGCC 
CGCCCCGTCG GCGTGGGTCC ATACCCGGCC GTGCTGGTCT TCATCGAGGC CTTCGGAGTC
AACGCACACT TTCAGGACGT GGCCCAGCGT CTTGCCCGGG CGGGTTATTG CGCCATGGTG
CCCGACCTGT ATCACGGCAA GACCTATGAT TATTCCGACT TTGACGGTGC CATCGGCCAC
CTCAAGACCC TGAACGACGC AGTCGTCATG CAGGAGGCGG GCCTGGCCAT CCAGGCACTG
CAGCAACGTG CCGAGGTGCG CAAGGACGCC ATCGGGGCGC TGGGGTTCTG TATGGGCGGA
CGCTACGCCT TCATGGCCAA TGCCATCCAT GCAGACCAGC TTCGCGCCGC GGTCGCCTTC
TACGGCGGCG GTATTGCCCC CGATCAGGAT TCCGTCGGAC GTAAGCCAGT GCTGCATCTG
GTGGACCAGA TGCGGGCGCC GCTGCTGCTG CTTTACGGCG CGGAGGACCA ATCCATCACC
CCCGAAGAAC ATGGTCGCAT CGCCACCGCG CTCAGCACCG CCGGCAAACG CTATACCCTG
ACCGTGTTTC CGGGTGCGCC ACACGGCTTT TTTGCGGATC CCCGGGGCAG CTTCCGTCCC
GATGCCGCGC AGGAAGGCTG GCGCCTGACC CTTGACCACT TCACCCGTTA CCTCGGAGCA
TCCGCATGA
 
Protein sequence
MSQITSEWVQ LENGPRAWYA RPVGVGPYPA VLVFIEAFGV NAHFQDVAQR LARAGYCAMV 
PDLYHGKTYD YSDFDGAIGH LKTLNDAVVM QEAGLAIQAL QQRAEVRKDA IGALGFCMGG
RYAFMANAIH ADQLRAAVAF YGGGIAPDQD SVGRKPVLHL VDQMRAPLLL LYGAEDQSIT
PEEHGRIATA LSTAGKRYTL TVFPGAPHGF FADPRGSFRP DAAQEGWRLT LDHFTRYLGA
SA