Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1865 |
Symbol | |
ID | 6877849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 1846375 |
End bp | 1847103 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642789734 |
Product | Carboxymethylenebutenolidase |
Protein accession | YP_002220293 |
Protein GI | 198283972 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.613212 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCAGA TCACCTCTGA ATGGGTTCAA CTGGAAAACG GCCCACGCGC CTGGTATGCC CGCCCCGTCG GCGTGGGTCC ATACCCGGCC GTGCTGGTCT TCATCGAGGC CTTCGGAGTC AACGCACACT TTCAGGACGT GGCCCAGCGT CTTGCCCGGG CGGGTTATTG CGCCATGGTG CCCGACCTGT ATCACGGCAA GACCTATGAT TATTCCGACT TTGACGGTGC CATCGGCCAC CTCAAGACCC TGAACGACGC AGTCGTCATG CAGGAGGCGG GCCTGGCCAT CCAGGCACTG CAGCAACGTG CCGAGGTGCG CAAGGACGCC ATCGGGGCGC TGGGGTTCTG TATGGGCGGA CGCTACGCCT TCATGGCCAA TGCCATCCAT GCAGACCAGC TTCGCGCCGC GGTCGCCTTC TACGGCGGCG GTATTGCCCC CGATCAGGAT TCCGTCGGAC GTAAGCCAGT GCTGCATCTG GTGGACCAGA TGCGGGCGCC GCTGCTGCTG CTTTACGGCG CGGAGGACCA ATCCATCACC CCCGAAGAAC ATGGTCGCAT CGCCACCGCG CTCAGCACCG CCGGCAAACG CTATACCCTG ACCGTGTTTC CGGGTGCGCC ACACGGCTTT TTTGCGGATC CCCGGGGCAG CTTCCGTCCC GATGCCGCGC AGGAAGGCTG GCGCCTGACC CTTGACCACT TCACCCGTTA CCTCGGAGCA TCCGCATGA
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Protein sequence | MSQITSEWVQ LENGPRAWYA RPVGVGPYPA VLVFIEAFGV NAHFQDVAQR LARAGYCAMV PDLYHGKTYD YSDFDGAIGH LKTLNDAVVM QEAGLAIQAL QQRAEVRKDA IGALGFCMGG RYAFMANAIH ADQLRAAVAF YGGGIAPDQD SVGRKPVLHL VDQMRAPLLL LYGAEDQSIT PEEHGRIATA LSTAGKRYTL TVFPGAPHGF FADPRGSFRP DAAQEGWRLT LDHFTRYLGA SA
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