| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1833 |
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| Symbol | |
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| ID | 6877817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 1813817 |
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| End bp | 1814530 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642789702 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_002220261 |
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| Protein GI | 198283940 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.498087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAAT CTGCCGAGCG TATGGATCAT TTACTGTCCC GCCTAGGGTA TTGCAGCCGC
TCCGAAGTGC GCGACCTGTT GCGCGAGGGG CGCGTGCGCG TGGCTGGGGA ACTGCTGCGC
AAGGCGTCTG CCAAGGTGAA TGCGGCCGAG GTTTGGGTGG ATGAGGAGCC CATTGATCAT
CCCCATGCTT TCTATCTGCT CTATCATAAA CCTCTGGGGA AGGTCTGTGC TCACGATGAT
CCCCGCGCCA TCTATCAGGA TTTTCCCCTG CGCTGGCGCT ATCGGCGACC AGCGCTGAGC
AGTGTCGGTC GGCTTGACCG GGAGACCAGT GGGGTCCTGC TGCTCACCGA TGACGGTGAC
TGGCTGCACC ACTGGACGAG CCCCCGCCGT GCCATTCCCC GGGTATATCG GGTGACCCTG
CAGGAGCCGT TGCGGAGTGA CGCGGCGGAC ATCCTGGCCG CGGGAACCCT GATGCTGGAC
GGTGAAGACA CACCCTGTCG CCCTGCCGCG TTGCACTGCC TGACAGAGCG CGAGGTCCGG
CTGACCCTGA CGGAGGGGCG TTATCATGAA GTCCGCCGGA TGTTCGCGGC GCTGGATAAT
CTCGTGCTGA CTCTGCATCG GGAGGCCTAC GGCCCTTTTT TGCTGGACGA TCTCCCGGCC
GGTCAGTGGC GTGAACTCAC GGTGGCAGAG CGTATGACGG AGGAAATTCC ATGA
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| Protein sequence | MQKSAERMDH LLSRLGYCSR SEVRDLLREG RVRVAGELLR KASAKVNAAE VWVDEEPIDH
PHAFYLLYHK PLGKVCAHDD PRAIYQDFPL RWRYRRPALS SVGRLDRETS GVLLLTDDGD
WLHHWTSPRR AIPRVYRVTL QEPLRSDAAD ILAAGTLMLD GEDTPCRPAA LHCLTEREVR
LTLTEGRYHE VRRMFAALDN LVLTLHREAY GPFLLDDLPA GQWRELTVAE RMTEEIP
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