Gene Lferr_1793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1793 
Symbol 
ID6877776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1773337 
End bp1774002 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content64% 
IMG OID642789662 
Producthypothetical protein 
Protein accessionYP_002220221 
Protein GI198283900 
COG category[S] Function unknown 
COG ID[COG3009] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.593352 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACACC TTTACTCCGA ATGTTCACCA GTCGGGAAGC GCATGGCACT GGCGGGTCTG 
CTCCTGCTCG CCACAGGTTG TGCCACCAGC GTTTCCTGGC AGGCGCCCTA CGATATTACG
CCCCCGCATC CTGCCCCTCT GGCCAGCACC ACGAGATCAA CGGCGACGCT GCCCGTGCTG
CGGCTGGGGC CGGTCAGCGC CGTGCAGTGG CTGGAAACGG ACAATTATCA GTACCACCTG
CTCTACCAGG ACCAGCAGCG ACTGCTGGCC TACCGGGATG CCCGCTGGAT CGGGACCCCG
CCGCAGATGA TTGCCAGTCG TCTGCAACGG CAACTGGAAG AATCCGGCCA GTGGCGGGCC
GTGTTGACAC CACTGTCGAG AGGTCGTTCC GTCTGGTTGC TACAGGTCAG GCTGACGGAC
TTCGTGGTGA ATTTCAGCGG TCCGGATGCG GGCGCGGCGC TGGTTGCCGG TACGGCGACA
CTGGTGAAAA CTGCCGATTA TCAGGTGATC GCGCAGCGGC ATTTCAGTTT CACCGAGATG
CTTCCCAGTG CGAGTGCGCA GGGCGGCGCG AAGGCGATGG CCACGGCCAG CTCACGCTTC
GTGAGGGCGA TAAGCAGTTG GGCGGCGCAG ACGGCGGCTA CGGAGCTCTC CGCGCGCCAG
CCCTGA
 
Protein sequence
MRHLYSECSP VGKRMALAGL LLLATGCATS VSWQAPYDIT PPHPAPLAST TRSTATLPVL 
RLGPVSAVQW LETDNYQYHL LYQDQQRLLA YRDARWIGTP PQMIASRLQR QLEESGQWRA
VLTPLSRGRS VWLLQVRLTD FVVNFSGPDA GAALVAGTAT LVKTADYQVI AQRHFSFTEM
LPSASAQGGA KAMATASSRF VRAISSWAAQ TAATELSARQ P