| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1701 |
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| Symbol | |
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| ID | 6877682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 1668729 |
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| End bp | 1670078 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642789569 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_002220130 |
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| Protein GI | 198283809 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.103741 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTGC GATTATGGCC TGCAATCCTG GTCAGCCTGT TGTTACTGCT GGCCGGATGT
GCGAGTTATC AGGCAGCACC CTTGCCTGGA CATCTATCCT CTGTGCAGGA TGTGCATCGG
GAAATGGCGG CGGCGCTGGC GCGGATGCAC CCTCATGCCC AGCCGATAAA TTTGCATGGG
CCATTTTCTG GCGAGGATCT TGGGGCGATT GCCGTGTTGC TCAACCCACA GTTGCGTGCC
ATGCGGGCCA ATCTGGGGGT CGCCCAGGCC CAGGTTTTCG CGGCCGGTTT GCTTCCCGAT
CCCCAACTGT CACTCAGTGC GGACTTGCCC AGCAATGTCG CAGCCGGTTA TTACAGTGCC
TATAGCATGG GTTTGAGTTG GAGCCTCGCC AGTCTGTTTA CCCGCTCTGC CAATCTGGAT
ATTGCCCGCG CACAGCAAAA GTCCGTGCAA TATCAGGTCG CCTGGCAGGA GTGGATGCAA
GCGGGTAATA CGCGCGTTCT CGCCCGTCAG CTTTATTATC TGCGGGCGCA GGAAGCGGTA
GCGGAAGCGG CGGCCAAGAC CACCGGGAAA TTGTATCAAG CCTCTGCTGA AAATTTACGT
CTTGGCGATA CCACCATCAC CACCGCAACA TTACGGCAGA TTGCCTGGCT GGATAGTCAG
GATCGGGCTC TCGCCTTGCG TCGACAAGTC ACCACCCTGC GCCAAAATCT CGACCAATCC
ATAGGCCTGC CACCGAAAAT GGCGATCGGC ATAAAGCCCC CGCGGCTCTG GCCCAGCCTG
CCAGATGCCG CGTTTCTGGT AACATTGGCC GACCAGCATC GGCTTGATCT GGTGGCACTG
CGGGCTGGTT ATCAGGCGCA GGAAGCCCGG GTACGACGTG CCATTCTCGG CCAATACCCA
GGCTTCACCA TTGGCTTCAG TAGGGCCGCC GATACCTCCA ATGTGCAGAG CTACGGCCCA
AGTTTGACGC TGGATATTCC CCTCTGGAAC CGGAACCGTG GGGTTATTGC GGAAAGCGAG
GCTACCCGCG CGCAACTCCG GGCAGCCTAT ACCGCCCGTC TGTTTCAGAC GCGCGCCGAC
ATTTTTCGAC TGGTGACGGA TCTCCGCCGC CTGGCACAGG AAATCAAGCC CCTGCAGCAA
CAGGTTCCGG AACTGGCGAA GGCCGAAAAC CGATTACGCA GGGCCGCTGC GGAACACAAC
GTGACATTGC TGGATTATGA GACCGTACGC AGCCAATCCC TGGCCAAGCG TCTGCAATTG
CTGGCGCTGC AGGAATCCTA CGCTGCCCAG CAGGCAGCGC TGGAAATGGC GGTCGGTTTA
CCTTATTCAG ATTGGGAGAG TCGGAAATGA
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| Protein sequence | MALRLWPAIL VSLLLLLAGC ASYQAAPLPG HLSSVQDVHR EMAAALARMH PHAQPINLHG
PFSGEDLGAI AVLLNPQLRA MRANLGVAQA QVFAAGLLPD PQLSLSADLP SNVAAGYYSA
YSMGLSWSLA SLFTRSANLD IARAQQKSVQ YQVAWQEWMQ AGNTRVLARQ LYYLRAQEAV
AEAAAKTTGK LYQASAENLR LGDTTITTAT LRQIAWLDSQ DRALALRRQV TTLRQNLDQS
IGLPPKMAIG IKPPRLWPSL PDAAFLVTLA DQHRLDLVAL RAGYQAQEAR VRRAILGQYP
GFTIGFSRAA DTSNVQSYGP SLTLDIPLWN RNRGVIAESE ATRAQLRAAY TARLFQTRAD
IFRLVTDLRR LAQEIKPLQQ QVPELAKAEN RLRRAAAEHN VTLLDYETVR SQSLAKRLQL
LALQESYAAQ QAALEMAVGL PYSDWESRK
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