| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1700 |
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| Symbol | |
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| ID | 6877681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 1667692 |
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| End bp | 1668732 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642789568 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002220129 |
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| Protein GI | 198283808 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.116912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAACGC GGTTTTCGGG CGGAAAAATC CTGGCATGGG GATGCTGCCT GTGCTTGCTG
TTTGCGGGAT CCGCCGAGGC AGAGGTTTCC GCCCTGGTAA AAGTCACGCC GGCGCGAATG
ATGTCCATGG CGGATCAGCT TCGTGTCTAT GGTACCGTAG AGTTTGCGCC GGAAGACGGC
AGAACCATCG TGCTGCCAGC CGAAACCCTG GTCAGTCAGG TACTGGTGGC CGCCGGGCAG
AGGGTAAAGC AGGGGCAACC CATGCTGCAG GTACAACCCT CGGTCGGTGA TCAACTGCAA
CTGAAGCAGG CGGAAATTGG CCTGAAATTC GCTATTGCCG ACCAGCACAG GGTGGCGAAC
CTGCGTCAGC GCCAACTGGC GACCAATAGC CAACTGCAAA CTGCCGATCA ATCCCTGGCT
CGTGCGCGGG CGGCTCTGCA GGACATCCAG TTGCGTCTGC AACAACTGAA GAACGGACAA
GTGTCCGCAC CCATCAATGG GGTAGTGACC ATCGTGCATG TGCATCAGGG TGACCTCGTC
CCCGCTGGTC AGCCTTTGCT CAGCCTGAGC ACAGGAAATG CCCTGCGCGT TTTGTTGGGG
GTGGAACCGG GGATCTTGCC GCGTATTCAT GTGGGGGATT CGGTGAGCCT GCTTCCCGTA
TATGGGGGGC AGGCGCCGGT GCAGGGAAAA GTCAGCCAGA TCTATAGCCA GATTGATCCG
CAAACCCGAC TTGCCCAGGT GGTGGTGCCA TTGCCCGCCA GTCCGGATTT GTTGCCGGGA
GCCATGCTGC AGGCGGAAAT CGTCCTGCAC CACCAACGGG TCATCGCGGT CCCGGAGAGT
GCCGTTCTGC AGCAGGACGG CAGGTCCTAT TGTTTCGTGG ATGTGGCGGG TAAAGCCCAA
AAACGCTGGA TTGACACGGG TTGGCAGCAG GCAGGCTGGA TAGCGGTGAA GCAAGGGCTC
AGCGCAGGTG ATCCGGTGGT GAGTCTCGGC AACTACGAGC TCAAAGCAGG AATGGCCTTG
CGGGTAGAAG GGAAATCCTG A
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| Protein sequence | MRTRFSGGKI LAWGCCLCLL FAGSAEAEVS ALVKVTPARM MSMADQLRVY GTVEFAPEDG
RTIVLPAETL VSQVLVAAGQ RVKQGQPMLQ VQPSVGDQLQ LKQAEIGLKF AIADQHRVAN
LRQRQLATNS QLQTADQSLA RARAALQDIQ LRLQQLKNGQ VSAPINGVVT IVHVHQGDLV
PAGQPLLSLS TGNALRVLLG VEPGILPRIH VGDSVSLLPV YGGQAPVQGK VSQIYSQIDP
QTRLAQVVVP LPASPDLLPG AMLQAEIVLH HQRVIAVPES AVLQQDGRSY CFVDVAGKAQ
KRWIDTGWQQ AGWIAVKQGL SAGDPVVSLG NYELKAGMAL RVEGKS
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