Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1676 |
Symbol | |
ID | 6877656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 1640573 |
End bp | 1641130 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642789543 |
Product | hypothetical protein |
Protein accession | YP_002220105 |
Protein GI | 198283784 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.991452 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAACGC GGCTAAACGA GGTGCGTATG ATTTACACAG TTGAATGCAG CTTTACCGAC CCGGCCGCAG AGAATGAATG GAATGCTTTT TACAGCAATG AAAAGTTGCC CGCGTTAATT TCCGTTAGGG GGTTTCTCAC ATCCCAAAGA TTTAGGTTGT CCGGTGGAAT ACCTTCTGCG CCAACTTATC TCGCTATTCA CACTATTTCC AATGAGGGGA TTCTTGAAAG CGCTGATTAT CATCAAAATG GTGGCGGCAA TTTTGCAAAA TGGCAACCCA TGATCACAGC TTGGCATAGG AATATTTATG GAGGAGTCGA TCTGTTCGCA AATGTCACAA ATGATCAGCG AGTGTTAATT AGCAATGAAA GTGGTGACGC ATTAAAAGCG CTCGGTTTTC AGGTGCTGCA TTTATGGGCA ACAGGACTTG ATCGTACGCC GATGGAACGT TGGGTGGCGA TTTCCGGCAA TCTACCAGAT CCTGCCCATC ATCTGAAAGC AGATGGAGTA TGTGTATACG TCCCTATGGG AAGTCAATTA CAGAGTGATT CCACATAA
|
Protein sequence | MKTRLNEVRM IYTVECSFTD PAAENEWNAF YSNEKLPALI SVRGFLTSQR FRLSGGIPSA PTYLAIHTIS NEGILESADY HQNGGGNFAK WQPMITAWHR NIYGGVDLFA NVTNDQRVLI SNESGDALKA LGFQVLHLWA TGLDRTPMER WVAISGNLPD PAHHLKADGV CVYVPMGSQL QSDST
|
| |