Gene Lferr_1629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1629 
Symbol 
ID6877609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1595835 
End bp1597073 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content56% 
IMG OID642789496 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002220058 
Protein GI198283737 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00218526 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000020409 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGCGGAAAA AATTTAAGAC ATTCAGATGG ATTTCCAGCA CCTATTACGC GGAAGGGTTG 
CCCTATTCGC TGGTGCAACA GGTGTCCGTA CAGTTTTTTA CCTATGCAGG CGCCAGCTTG
CAGGTTATCG GACTACTCTC GTTTTTCGGA CTACCCTGGA ATTTGAAACT ATTCTGGAGC
CCCTTGATCG ACCTTTTCGC GGACAAAAAG CGTTGGCTTG TGGTGATGGA AATCATCTTG
GGTGGCGTGG CCGCCTTGCT GATCTGGCCA GCACAGCACC TGAATCTGGA CCTCGCCGCC
AAAATTTTTA TGTTAATGGC CTTCCTGTCG GCCACCCATG ATATGTCCGT AGACGGGTAT
TATATCCAGA CACTCAGCCC ATCCGATCAG GCGGCTTTTT CCGGATTGCG GGTTGCAGCC
TATCGGATTG CCATGCTGGT GGGAAACGGC GTGCTGGTCA TTGTCGCCGG GTGGATATCC
TGGATCGCCT GTTTTTTAAC TGCGGCGGTG ATGTTATGGG GATTGGCGGC TTTTCATCAG
CGCGCACTGC CGCCATCGCC CCCGTCCACG AGTCACAAAG GACAGCATTG GCACGCCGTG
CGCGAAGCTT TCACCACCTA CATGCAGCAA CCAGGGATTC TTTGGGCACT GGCTTTTATC
CTGCTTTTCC GCGCGGGCGA CGCCATGATG GCGGCTATGG TGACTCCGTT TCTCAGTCAT
TTGGGCTACG GCTTGATGGC GCGCGGCATT CTCACCGGAA CAGTAGGGAC GGTGACGACT
ATCGGAGGCG CCTTGCTGGG CGGTATCATC ATATCCCGTT GGGGGTTGCG CCATGCATTG
CTGCCGTTGA CGTTGATTCA ATCCCTGGCG ATTCCGGCCT ATGCGTGGCT GGCCTGGGTG
ATGCCCTCTG TGTGGTGGGT AGGTGTCACA GTGGCCTTTG AGCAGGCTGC GGCGGGTCTC
GGCACCGCCG TTTTGATGGT CTTCCTCATG CAGCGTTGTC GGGGTGATTA CCAGGCCACG
CATTTTGCTA TTGGCTCCGC CCTGATGTCC GTGGCAGCCA CGGTTGTCGG CGGATTTAGC
GGTTTTCTTG CAGCACAGGT GGGATTTGTG GAATTCTTTC TACTGGCGTT TGCGGCGGCA
CTACCTAGTT TGTGGTTGGC GCTGCGCATG CCGGCGGTCC TGTTTACAGA TCGTCAGGAA
TCCATGCCGG GATCGGACCT TTTTGATGAA AACGTCTAA
 
Protein sequence
MRKKFKTFRW ISSTYYAEGL PYSLVQQVSV QFFTYAGASL QVIGLLSFFG LPWNLKLFWS 
PLIDLFADKK RWLVVMEIIL GGVAALLIWP AQHLNLDLAA KIFMLMAFLS ATHDMSVDGY
YIQTLSPSDQ AAFSGLRVAA YRIAMLVGNG VLVIVAGWIS WIACFLTAAV MLWGLAAFHQ
RALPPSPPST SHKGQHWHAV REAFTTYMQQ PGILWALAFI LLFRAGDAMM AAMVTPFLSH
LGYGLMARGI LTGTVGTVTT IGGALLGGII ISRWGLRHAL LPLTLIQSLA IPAYAWLAWV
MPSVWWVGVT VAFEQAAAGL GTAVLMVFLM QRCRGDYQAT HFAIGSALMS VAATVVGGFS
GFLAAQVGFV EFFLLAFAAA LPSLWLALRM PAVLFTDRQE SMPGSDLFDE NV