Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1629 |
Symbol | |
ID | 6877609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 1595835 |
End bp | 1597073 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642789496 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002220058 |
Protein GI | 198283737 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00218526 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00000020409 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | TTGCGGAAAA AATTTAAGAC ATTCAGATGG ATTTCCAGCA CCTATTACGC GGAAGGGTTG CCCTATTCGC TGGTGCAACA GGTGTCCGTA CAGTTTTTTA CCTATGCAGG CGCCAGCTTG CAGGTTATCG GACTACTCTC GTTTTTCGGA CTACCCTGGA ATTTGAAACT ATTCTGGAGC CCCTTGATCG ACCTTTTCGC GGACAAAAAG CGTTGGCTTG TGGTGATGGA AATCATCTTG GGTGGCGTGG CCGCCTTGCT GATCTGGCCA GCACAGCACC TGAATCTGGA CCTCGCCGCC AAAATTTTTA TGTTAATGGC CTTCCTGTCG GCCACCCATG ATATGTCCGT AGACGGGTAT TATATCCAGA CACTCAGCCC ATCCGATCAG GCGGCTTTTT CCGGATTGCG GGTTGCAGCC TATCGGATTG CCATGCTGGT GGGAAACGGC GTGCTGGTCA TTGTCGCCGG GTGGATATCC TGGATCGCCT GTTTTTTAAC TGCGGCGGTG ATGTTATGGG GATTGGCGGC TTTTCATCAG CGCGCACTGC CGCCATCGCC CCCGTCCACG AGTCACAAAG GACAGCATTG GCACGCCGTG CGCGAAGCTT TCACCACCTA CATGCAGCAA CCAGGGATTC TTTGGGCACT GGCTTTTATC CTGCTTTTCC GCGCGGGCGA CGCCATGATG GCGGCTATGG TGACTCCGTT TCTCAGTCAT TTGGGCTACG GCTTGATGGC GCGCGGCATT CTCACCGGAA CAGTAGGGAC GGTGACGACT ATCGGAGGCG CCTTGCTGGG CGGTATCATC ATATCCCGTT GGGGGTTGCG CCATGCATTG CTGCCGTTGA CGTTGATTCA ATCCCTGGCG ATTCCGGCCT ATGCGTGGCT GGCCTGGGTG ATGCCCTCTG TGTGGTGGGT AGGTGTCACA GTGGCCTTTG AGCAGGCTGC GGCGGGTCTC GGCACCGCCG TTTTGATGGT CTTCCTCATG CAGCGTTGTC GGGGTGATTA CCAGGCCACG CATTTTGCTA TTGGCTCCGC CCTGATGTCC GTGGCAGCCA CGGTTGTCGG CGGATTTAGC GGTTTTCTTG CAGCACAGGT GGGATTTGTG GAATTCTTTC TACTGGCGTT TGCGGCGGCA CTACCTAGTT TGTGGTTGGC GCTGCGCATG CCGGCGGTCC TGTTTACAGA TCGTCAGGAA TCCATGCCGG GATCGGACCT TTTTGATGAA AACGTCTAA
|
Protein sequence | MRKKFKTFRW ISSTYYAEGL PYSLVQQVSV QFFTYAGASL QVIGLLSFFG LPWNLKLFWS PLIDLFADKK RWLVVMEIIL GGVAALLIWP AQHLNLDLAA KIFMLMAFLS ATHDMSVDGY YIQTLSPSDQ AAFSGLRVAA YRIAMLVGNG VLVIVAGWIS WIACFLTAAV MLWGLAAFHQ RALPPSPPST SHKGQHWHAV REAFTTYMQQ PGILWALAFI LLFRAGDAMM AAMVTPFLSH LGYGLMARGI LTGTVGTVTT IGGALLGGII ISRWGLRHAL LPLTLIQSLA IPAYAWLAWV MPSVWWVGVT VAFEQAAAGL GTAVLMVFLM QRCRGDYQAT HFAIGSALMS VAATVVGGFS GFLAAQVGFV EFFLLAFAAA LPSLWLALRM PAVLFTDRQE SMPGSDLFDE NV
|
| |