Gene Lferr_1589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1589 
Symbol 
ID6877565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1550463 
End bp1551464 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content61% 
IMG OID642789453 
ProductDNA-directed DNA polymerase 
Protein accessionYP_002220018 
Protein GI198283697 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0776499 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATGC CGCGCCCGAC GCCTGCGGAG TGGTCGCCGA TATGGAGACT GGTGCAAACC 
GGTCTGCCCC AGGCGATGCT TGCCGCAGGC GAGTCGGGAA CGCTGGTCGC ACAGTACTGC
GATGATTTGC AACAGGTGGC GCTGTGTTTT GCGCCAACGG CGCAGGGGCT GCCCTGTGGA
ACCTGCCGTT CCTGCCGTTT GTTGGCGGAG GGCAATCATC CCGATCTGCT GATGATCACT
CCCGAAACCG GAAAACGCAT CACCATTGAG GCGGTGCGCC ATGCCAACGA GTTCCTCGCC
TTCACCCCGC AGGTCAGCGC GTGTCGCTGG CTGCGCATCG CGCCGGCCGA GGCGATGACT
GCGGCGGCGG CCAATGCCCT GCTTAAAACC CTGGAGGAAC CTGCGGCGCG TGCCCATATT
CTTCTGCTCA GTGAACACCC GTCACAGCTT ATTCCCACCA TCCGATCCCG TTTGCAGAGA
TTGCCGTTCC CGACGATGCT TCCGGGGCAG TGCGTGAACT GGCTGGAAGG TCTCGGCATA
CCGCCTGCGG AGGCGCTCTC GTTAAGTCGG CAGTTTGCGA ACCGGCCATT GCGTGCCTGG
CAACTTTGGG AATCCGGATG GGTCACGCTG CGCCGAACCT GGATCGAGAC GCTGTTGAAC
CTTCCTCGGC AAGGGCCTGT CGCCGCTTTG CGGCTGGCAG ACAACTGGGC CAAAGACACC
GACTTGCTGC TGCTGCGCGA ACTGGTTCTA AGCCTGTTGG CGGATTTGCT GCGTCTTCAA
GGCCATCGCC TGGACAACGT CGTGCATTTA GACTATCTGC AATCGCTGGA GGTTATGGCG
CAATCGGCCC GGGTCGCGTG CCTCTGGCCG GCCCTGGAGG GGTGGGCGCG GCTGCCTGAG
TCGCTTGCGC AGAATCGCAA TGTGGGGATG ACACTGGAAA CGTTATTGTT GAATTGGGTA
GGCATTTGGT CAGGACAGGT GGCGCATGGA ATTACAAGCT GA
 
Protein sequence
MNMPRPTPAE WSPIWRLVQT GLPQAMLAAG ESGTLVAQYC DDLQQVALCF APTAQGLPCG 
TCRSCRLLAE GNHPDLLMIT PETGKRITIE AVRHANEFLA FTPQVSACRW LRIAPAEAMT
AAAANALLKT LEEPAARAHI LLLSEHPSQL IPTIRSRLQR LPFPTMLPGQ CVNWLEGLGI
PPAEALSLSR QFANRPLRAW QLWESGWVTL RRTWIETLLN LPRQGPVAAL RLADNWAKDT
DLLLLRELVL SLLADLLRLQ GHRLDNVVHL DYLQSLEVMA QSARVACLWP ALEGWARLPE
SLAQNRNVGM TLETLLLNWV GIWSGQVAHG ITS