| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1574 |
|---|
| Symbol | |
|---|
| ID | 6877550 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 1538920 |
|---|
| End bp | 1539537 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642789438 |
|---|
| Product | manganese and iron superoxide dismutase |
|---|
| Protein accession | YP_002220003 |
|---|
| Protein GI | 198283682 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0605] Superoxide dismutase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0011707 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGAAT ATAGCGTGCG CGAAGAATTG AAGCCCAGCG GCCTGGATGG CATCTCCGAT
GCCCAAATTA CGGATCACTG GGGCCTTTAT GTAGGTTATG TCAACCAGAG CAATGCGTTG
CACAAAGAGC TTGCAGAAAT GCGGGCGGCG GGTAAAACCA GTTCCCTCGC CTATGCAGAT
CGCCGCAGGC GCTTTGGCTT TGAGTATAAC GGCATGGTTT TACATGAGTA TTATTTTGCG
CAACTGAAGC CGGGCAGCAG TATCGATCAG GCACCCGGCT TCAAGGCAGC GGTCACGGAA
CAGTTTGGCA GCGCTGAGGT ATGGCACGAA GATCTGGTGT CTGCGGCCAA GAGCCGGAGC
GTGGGTTGGG CCATCGCTTA TTATGATGGT ACTACCGGTC AGATCAACAA CCACTTCGTT
CAACTCCACG AAGACGGTAA CGTGGGTGGT TTCGTGCCGC TGGTTATCGT CGATGTCTTC
GAGCACGCCT ATATGGTGGA CTGGAAGGCA CTTGGCCGCG CGGATTACCT GGCAGCCGTT
CACAAAAACA TGAACTGGGG CGTGGTGGAA GCGCGCTTCC AGGCAGCCCG AAGTGGTCAG
ATTTTCAAGC GCTTCTGA
|
|---|
| Protein sequence | MSEYSVREEL KPSGLDGISD AQITDHWGLY VGYVNQSNAL HKELAEMRAA GKTSSLAYAD
RRRRFGFEYN GMVLHEYYFA QLKPGSSIDQ APGFKAAVTE QFGSAEVWHE DLVSAAKSRS
VGWAIAYYDG TTGQINNHFV QLHEDGNVGG FVPLVIVDVF EHAYMVDWKA LGRADYLAAV
HKNMNWGVVE ARFQAARSGQ IFKRF
|
|---|
| |