Gene Lferr_1542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1542 
Symbol 
ID6877517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1495939 
End bp1496358 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content55% 
IMG OID642789405 
Producthypothetical protein 
Protein accessionYP_002219971 
Protein GI198283650 
COG category[S] Function unknown 
COG ID[COG4731] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00714923 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACGTC TTTTAGCTCG TTGCTTTATT CTCACCGGGC TACTTTTGGG GAGTATCGGT 
ATCGCTTTTG CAGGCACAGA ACGCGGGAGC ATTACCGGCT TGTGGCAAAC TGCGGGGGGC
AACGGGTATA TCCGCATTTA CGCAAAAAAT GGGGTGCTCT TCGGACAGAG CGTGAGGCAT
ATGCAGGAAA CTGTGCAGCA GGCCCGCGCC GAGGGTCAGC CGCAAATTCT GGCGGACTTC
GTACCCAGAC GTCCGGGAGA ATGGGCTAAG GGCCGCATTT ACGACCCGAA CAGCAAAACC
TACTACCATG GCACACTGAC GACTCTGGAT TCCCGCAAGC TCAAGGTGTA CGGTTATGTC
GGCTTTTCGT GGCTCGGCGG CAACACCATC TGGACCAAGG TTCCATCTAA ATCGCGGTAG
 
Protein sequence
MKRLLARCFI LTGLLLGSIG IAFAGTERGS ITGLWQTAGG NGYIRIYAKN GVLFGQSVRH 
MQETVQQARA EGQPQILADF VPRRPGEWAK GRIYDPNSKT YYHGTLTTLD SRKLKVYGYV
GFSWLGGNTI WTKVPSKSR