| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1527 |
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| Symbol | |
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| ID | 6877502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 1484740 |
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| End bp | 1485708 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642789391 |
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| Product | HhH-GPD family protein |
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| Protein accession | YP_002219957 |
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| Protein GI | 198283636 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0472301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.34415 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATACT ACTTCCGCCT CAGCCCGCGA CCGCCCTTTC GTTTGGATCT CACGGTCTGG
GCGCTGCGCC GTCAAGCCCA TAACAGGATG GATGGCTGGG AGAGCGAAAC CTATCGGCGC
GTCTGGCGCT ATGGGGACGA CTGGCTGAAA GTCCGGCTCT GGCAGACGAA GGGCGATCCC
GATCCGTTTC TGGAAGGAGA AATCTACGAA GGCCCCCAGG ACGAGCGGAC CGTCTCCTGG
GTCCGCGCGC AACTCACCTG GATGCTAAGC CTGGATCGGG ATCTTGGCCC CTTTTACGTG
GTAGCCGCTG GAGATCCTCG TCTCGCGTCC TTGGAGGCGC GCTACCGAGG CCTCCGACCA
CCCCGTTTCC CATCCCTCTT CGAGGGCATG GTCAATGCCG TCGCCTGCCA GCAACTGAGT
CTGCATCTGG GTATCACTCT CCTCAACCGA CTCTCGGAGC TCTGCAGGGA GGGGGTGGGA
GAAATGGACC AGGTGTACCC TTTTCCGGAT CCTGGCTCTC TGCTGCGGCA GGAGGTGACG
GCCCTGCGTG GTCTAGGCTT CAGCGGCCAG AAGGTGACCG CCTTGCGCGC GCTGGCGGAA
GAAGCGGCGG TCGGCGGACT GGAGCGTGAA GACTGGCAGC ATTTGCCCAA CGCCGCAGCC
GTGCAGCGTC TGCTGCGTTT GCGCGGCATC GGCCGCTGGT CGGCGGAGTA CGTCCTGCTG
CGCACCCTGG GGCGTCTGGA CGTTTTCCCC GGTGACGACG TGGGGGCGCG CAAGGCCCTG
GCCCGCTGGC TGGAGGAAAA CGGCAGCTTG GATTATGCCC AGGTCGCCCA CCGGCTCCGG
CCATGGCAGC CCTACGCCGG CATGGTATAT TTTCTGTTGT TGATGCGGCG ACTGGAAGGC
GAGGGCCGTA TGTGGAACCC CGGCGATGAA CTGCCGCTGT CCCAATCGGA TCAGGCGGAC
AGGCGGTAA
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| Protein sequence | MGYYFRLSPR PPFRLDLTVW ALRRQAHNRM DGWESETYRR VWRYGDDWLK VRLWQTKGDP
DPFLEGEIYE GPQDERTVSW VRAQLTWMLS LDRDLGPFYV VAAGDPRLAS LEARYRGLRP
PRFPSLFEGM VNAVACQQLS LHLGITLLNR LSELCREGVG EMDQVYPFPD PGSLLRQEVT
ALRGLGFSGQ KVTALRALAE EAAVGGLERE DWQHLPNAAA VQRLLRLRGI GRWSAEYVLL
RTLGRLDVFP GDDVGARKAL ARWLEENGSL DYAQVAHRLR PWQPYAGMVY FLLLMRRLEG
EGRMWNPGDE LPLSQSDQAD RR
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