| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1522 |
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| Symbol | |
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| ID | 6877497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 1480271 |
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| End bp | 1482301 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642789387 |
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| Product | transketolase |
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| Protein accession | YP_002219953 |
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| Protein GI | 198283632 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.566213 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACTC CAACAGCCCC CTTTGGGGGG GAATACACAT CCATTGATCA GCTTTCTATC
AATACGATTC GCACGCTGGC TATGGACGCT GTGCAACAGG CCGATTCAGG GCATCCAGGG
ACGCCCATGG CGTTGGCTCC AGCCGGCTAC GTGCTATGGA CGCGATTCCT TCGACACCAT
CCGTGCAATC CCATGTGGTT CAACCGGGAC CGCTTCGTCT TATCGGCTGG GCATGCCTCC
ATGCTGCTGT ATGCCTTACT CCATCTCAGC GGATATGACC TTTCACTCGA AGAAATCCGG
CATTTTCGTC AATGGGGCAG CAAGACTCCC GGACATCCGG AATACGGCCT CACTCCAGGG
GTAGAAACCA CCACTGGCCC TCTTGGTCAG GGCCTGATGA ACGCGGTGGG CATGGCCATG
GCCGAGGCCC ATTTGGCAGC CCGCTTCAAC CGGCCGGGAT ATGAAATCAT CAATCACCAG
ACCTACGTTT TTTGTAGTGA CGGCGATCTC ATGGAGGGGG CATCCCACGA AGCCGCTTCC
CTGGCTGGGC ATTTAGCTTT GGGCAAACTG ATCGTGCTCT ATGACGACAA CCACATTACC
ATCGAAGGGA GTACGGCACT GGCCTTTTCC GACGACGTCG CCCGGCGTTT CGACGCTTAC
CATTGGCATG TCCAAAACCT GGGCGAGGCG GCGAATGAGC TCGACACATT GGAGAACGCC
TTCCGTAATG CGCAGCAGGA AAGCAATCAG CCCTCCTTGA TCATCGTCCG GTCTCATATC
GCCTATGGCG CCCCTCATGC CCAGGATACC GCCAAGGCCC ATGGAGCCCC GTTGGGGGAA
GCGGAGATTC GTGCCACGAA AGCGTTCTAT GGATGGCCAC CGGACGCCGG ATTCCTCGTC
CCGGATCCGG TGTTAATGCA TATGCGTCAG GCTCAGGAGC GCGGGGCGGA TCTGGAATCG
GCATGGAATC GGAAATTCGA AGCCTATCAG AAGGATTACC CCCAGGAGGG CGCCCATCTG
ATAGCGGCCA TGGCGGGGGA GCTTCCTGAA GGTTGGGACG AGAACATTCC CCACTTTACT
CCTGAGGATG GCCCCATGGC GACTCGGGTG GCCTCCGAGA AGACTTTGAA CGCTTTTGCC
GATAAGGTTC CCTGGTTGAT GGGCGGTAGC GGAGATCTGG CGCCGTCCAC CAATACCCGG
ATCGCCAGTT CCGGGGATTT TGAAAAAGAC GGTTACAAAA ATCGCAACAT TCACTGGGGG
GTGCGCGAGC ACGTCATGTG TGCCGCCTGT TCCGGTATGG CGCTCCATGG CGGGATTCGC
CCTTATGGCG CAAGTTTTCT GATCTTCACC GACTATGCGC GGCCGGCCAT CCGTCTCGCC
GCCATGATGA GGCTGCCCGT GATTTACGTG ATGACCCACG ATTCCATCGG TCTCGGGGAA
GATGGACCGA CGCATCAACC GATAGAACAT CTGGCGTCGT TCCGCGCCAT GCCCAATCTG
TGCGTAATCC GTCCAGCCGA TGCCAACGAG GCGGCCTATG CGTGGCGTGC GGCCATCATC
CGCCGGGACG GGCCTACGAT GCTCGTCCTT ACGCGGCAAT CCCTTCCCGT ATGGGACCGC
AGCCTTCTCG GTGAGGCCAG AGGGAGCATG CAGGGGGCCT ATGTGCTGTC CCGAGAACGG
GGCGGTCGCC CTCATATTCT TCTCCTAGCC AGCGGTTCCG AGGTGCAGCT CGTTCTGCAA
GCCCAGGCCA AACTATACGA GCGAGGAATA GATGCCCGGG TGGTCAGCAT GCCCAGCTGG
GAGCTGTTCC GCGCCCAGCC AGCGGCTTAC CGGGATACGG TGCTCCCACG AGATATCAAA
GTCCGGCTCG CCGTAGAGGC TGCGGCATCC CTGGGGTGGT GCGAATGGGT GGGAGAGGGC
GCCACCATAG GCCTGAGCCG CTTCGGCGCC AGTGCACCCT ATCCAGAAAA TTTCCGCCAT
CTGGGATTCA CCGTGGATAA TGTGGTACAG GAAGCCCAAC GGCTATTATA A
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| Protein sequence | MTTPTAPFGG EYTSIDQLSI NTIRTLAMDA VQQADSGHPG TPMALAPAGY VLWTRFLRHH
PCNPMWFNRD RFVLSAGHAS MLLYALLHLS GYDLSLEEIR HFRQWGSKTP GHPEYGLTPG
VETTTGPLGQ GLMNAVGMAM AEAHLAARFN RPGYEIINHQ TYVFCSDGDL MEGASHEAAS
LAGHLALGKL IVLYDDNHIT IEGSTALAFS DDVARRFDAY HWHVQNLGEA ANELDTLENA
FRNAQQESNQ PSLIIVRSHI AYGAPHAQDT AKAHGAPLGE AEIRATKAFY GWPPDAGFLV
PDPVLMHMRQ AQERGADLES AWNRKFEAYQ KDYPQEGAHL IAAMAGELPE GWDENIPHFT
PEDGPMATRV ASEKTLNAFA DKVPWLMGGS GDLAPSTNTR IASSGDFEKD GYKNRNIHWG
VREHVMCAAC SGMALHGGIR PYGASFLIFT DYARPAIRLA AMMRLPVIYV MTHDSIGLGE
DGPTHQPIEH LASFRAMPNL CVIRPADANE AAYAWRAAII RRDGPTMLVL TRQSLPVWDR
SLLGEARGSM QGAYVLSRER GGRPHILLLA SGSEVQLVLQ AQAKLYERGI DARVVSMPSW
ELFRAQPAAY RDTVLPRDIK VRLAVEAAAS LGWCEWVGEG ATIGLSRFGA SAPYPENFRH
LGFTVDNVVQ EAQRLL
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