Gene Lferr_1499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1499 
Symbol 
ID6877473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1460224 
End bp1460973 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content60% 
IMG OID642789367 
Productprotein of unknown function DUF6 
Protein accessionYP_002219934 
Protein GI198283613 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0456527 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTGGTCCT GGCGCCGTCG TCATGAGTTG CGGCAGCACG GACGCACTCT GGTCGGACTG 
TTCCTGCTTG GTGGCTGGAC CAATGTGGCC TTCATGCTGG CGTTGGTGCA TGGCGAGGTC
GTCCGTATTT TGCTGCTCTT TTATCTTTCG CCGGTTTGGG CCATTTTTTC CGCGCGGATT
TTTTTGAAGG AGGCGATCGG CTGGCGCGGC GTCCTTGCGG CCCTGCTGGC AGTGGCCGGG
TCGGCTCTGG TGGTCAGCAA TGGCCGGGGG TTTTCTTTTG CGGACCTCGA TATGAATGAC
TTGCTCGCCA TATCTTCGGG CCTCGCCTTC GCGCTGAGCA ATGTCATTCT GCGTGCGGAC
ACGGCACTCG GTGATATGCA TCGCGCCACT GCGGTATGGT GGGGCTGTGT GCTGCTTGCC
TTGCCTTTTG CGCTTTTTCA GCGGTTACCG GCACTATCCC TGCCGGACTA TGGTTATCTG
CTGGCCTTTT CCTGGCTGTG GATTGCCGGG GCGACGGTGG CGGTACAATT CGGTGTCGCG
CGGATGCCGG TAAGCGTTTC GGCGGTGATC ATGCCTTTTG AGGTCGTCGT GGGTGCACTA
TCGGCCTGGT GGTTGGCCGG GGAAGCACCG ACGCTCCTCG AATCGTTCGG GGGGACCCTG
ATACTGACCG CGGCGCTTCT GCAGATTACC CGCAGCCAGG GGCATCCGGT TTTACTCGGG
GGCGTCGAAA TGGAGAAGGG CGAACTCTAA
 
Protein sequence
MWSWRRRHEL RQHGRTLVGL FLLGGWTNVA FMLALVHGEV VRILLLFYLS PVWAIFSARI 
FLKEAIGWRG VLAALLAVAG SALVVSNGRG FSFADLDMND LLAISSGLAF ALSNVILRAD
TALGDMHRAT AVWWGCVLLA LPFALFQRLP ALSLPDYGYL LAFSWLWIAG ATVAVQFGVA
RMPVSVSAVI MPFEVVVGAL SAWWLAGEAP TLLESFGGTL ILTAALLQIT RSQGHPVLLG
GVEMEKGEL