Gene Lferr_1408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1408 
Symbol 
ID6877382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1366430 
End bp1367329 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content61% 
IMG OID642789280 
Productconserved hypothetical cardiolipin synthase 
Protein accessionYP_002219847 
Protein GI198283526 
COG category[I] Lipid transport and metabolism 
COG ID[COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTCTA TCGAACCACA GGCAGGTCCA GCGCCCATTA TCCAGGTCAT CCATTCGTCC 
CGCCGTGAAC TGGACGTAGG CGTGTATTAT CTGTCCGACC GCAAAATCCT TCGCGCCCTC
GCTGCGGCTC ACCGTCGTGG GGTGGATGTG CGCGTCATCA TCGAGGGCAA GCCCTACGGC
ATGAAGCCCT GGCAGGTGCG CCGGGAGGAA CGGACCATTG CCGCGACCGG CGCACGGTGG
AAGGTGGCCC CGCCGCGCTT CACCAGCCAC GGCAATGACT ACTCGTTTTT CCACTGTAAG
TATTGTGCCA ATGGGCATGA GGTCGAGATC GGCACGGCAA ATTTCGACTG GTCGGCTTTC
CACCGGAACC GGGAGTATGT CGATGTCACA CGCAACGCGA CCGTGGTTCA GGCGGTCAAC
GCGGTGTTCA ATGCGGACTG GACTGCGGCG CAGGGCGGCA ATCAACGCGC ACCGGCTTAC
GCGCATCGGG TGCTGGTTCT TTCTCCGGGG ACGTCTGCGG CGCAACTGCT GCAAGTGATC
GACCAGCCCG GTCCCATCGA CGTAGAGAGC GAGGAATTAG GGCCATACGC ACCCATTCTG
GATGCCCTGG CGGCGAAGGG CCGGAATCTC CGGATGATCC TGCCGGCCAG CATCAATGCG
AAGGATAAGC GGGCTGTGGC TTTCTTGCGG GAGCATGGCT GTCGCGTACG TTTGCTATCG
AAAAAGCCCT TGTACATGCA CGCCAAGATG ATCGCGGGCA AGTCGCTGGC CTTCATCGGC
TCCGAAAATT TCACCCAGAC CAGCCTGGAC AATAACCGGG AAATGGGCCT GCTGCTCAAC
GGGTCAGACA TCGGCAAGCT GCAAACGCAG TTCGATAAGG ATTGGGCGCG GGCCGGTTGA
 
Protein sequence
MLSIEPQAGP APIIQVIHSS RRELDVGVYY LSDRKILRAL AAAHRRGVDV RVIIEGKPYG 
MKPWQVRREE RTIAATGARW KVAPPRFTSH GNDYSFFHCK YCANGHEVEI GTANFDWSAF
HRNREYVDVT RNATVVQAVN AVFNADWTAA QGGNQRAPAY AHRVLVLSPG TSAAQLLQVI
DQPGPIDVES EELGPYAPIL DALAAKGRNL RMILPASINA KDKRAVAFLR EHGCRVRLLS
KKPLYMHAKM IAGKSLAFIG SENFTQTSLD NNREMGLLLN GSDIGKLQTQ FDKDWARAG