Gene Lferr_1388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1388 
Symbol 
ID6877362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1344053 
End bp1344385 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content56% 
IMG OID642789261 
ProductRibulose-bisphosphate carboxylase 
Protein accessionYP_002219828 
Protein GI198283507 
COG category[C] Energy production and conversion 
COG ID[COG4451] Ribulose bisphosphate carboxylase small subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACA TTCAAGACTA CGACTCAACA CCCAAGTACG AAACCTTCTC CTATTTGCCG 
GCAATGGGAC CGGAAAAAAT GCGTCGTCAG ATCGCCTATC TCGTGAACCA GGGCTGGAAC
CCCGGCATCG AGCATGTGGA GCCTGAACGC GCATCAACAT ACTACTGGTA CATGTGGAAA
CTGCCCATGT TCGGCGAGCA GTCAGTGGAC ACCGTTATTG CCGAACTGGA GGCATGCCAT
CGCGCCCACT CCAACCATCA CGTGCGCCTG ATCGGGTATG ACAACTACTC GCAGAGCCAG
GGCAGCGCTT TTGTGGTGTT CCGCGGGCGA TAA
 
Protein sequence
MADIQDYDST PKYETFSYLP AMGPEKMRRQ IAYLVNQGWN PGIEHVEPER ASTYYWYMWK 
LPMFGEQSVD TVIAELEACH RAHSNHHVRL IGYDNYSQSQ GSAFVVFRGR