Gene Lferr_1385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1385 
Symbol 
ID6877359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1339780 
End bp1340028 
Gene Length249 bp 
Protein Length82 aa 
Translation table11 
GC content55% 
IMG OID642789258 
Productcarboxysome peptide A 
Protein accessionYP_002219825 
Protein GI198283504 
COG category[C] Energy production and conversion
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4576] Carbon dioxide concentrating mechanism/carboxysome shell protein 
TIGRFAM ID[TIGR02703] carboxysome peptide A 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATTT GTCAGGTGGA AAAAACCCTG GTTTCGACCA ACCGGATCAA GGAAATGGGG 
CATCGCCCAC TGTTGGTGGT AAAGGAAAAA GGCGGTGCAA GAAGCATCGC CGTGGATGCG
GTGGGATGTG TTTCTGGCGA CTGGGTGATT TGCGTGGGTT CATCCGCAGC GCGCGAAGCG
GCGGGCAGCA AAGACTTTCC GAGCGATCTT ACCATCGTCG GCATCATCGA CCACTGGTCG
GAAGATTAG
 
Protein sequence
MKICQVEKTL VSTNRIKEMG HRPLLVVKEK GGARSIAVDA VGCVSGDWVI CVGSSAAREA 
AGSKDFPSDL TIVGIIDHWS ED