| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1364 |
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| Symbol | |
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| ID | 6877338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 1322237 |
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| End bp | 1324456 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642789237 |
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| Product | Transketolase central region |
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| Protein accession | YP_002219804 |
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| Protein GI | 198283483 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3957] Phosphoketolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.348759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCC ATACCGCCCT GCCCGCCAAC GCCCCTGCCT TTTGCGCCGG CATGTTCCAC
TTTGGTGAAT CCTGGCCGAA TTTCCAGGAG TATGGCCGCA GTGCCGCCAT AGCGACCGGA
CGCAAGGCCA TTCCCAATCC TGCGGCCATG GAAGCCGTCT ACCAGACCCT GCTCATGGCT
GATGCCCTGC GTTACTGCAC TTTACAGATC TGCGCCGCCA AGTCCTCAGG ACATCCTGGC
GGTTTTGCCT CTAGTACGGA GGCGTATGCC GCATTGGTGA TGCTCGGCCA CACCAACATC
GTCACCGAAG TAGGTCACCA CGCCCCGGGT TTCTACAGCG CTATGTTCCT TGACTGTTCC
CTGGAGGAAA TGGGTATCCG CGACATGAAC GACATGATGG CGCGTTTCCG CGAACAGCAT
GGACTGCTCG GTCATCTCTC CGGCGCAATC CCTGGCCTGC TGGCTCCCGC GGGCCCATTG
GGGCAGGGAC AGCACTTTGC CATGGCGGGC GCATTGCTGC ACCCTGGCAC CCTCTTCCCG
GTGACCATCG GTGACGGCGG TTTTGGGGAG CCTTATGTGC TGAGCGCCAT GAAGCACTTT
CACTTCGCTT ATCCGAGGGT TACCAATTAT CTGCCGGTGC TGGTCTGGAA TGGCTTTAGT
CAGGAACATC ACTCCATGGT TTCCCTGATG ACGAATGACG AGATGATCGC CTATTGGCGC
GCCCATGACT TCGACGAAGT CATCCTGGTG GATGCCAAGA ACTTTGACGA TGCCGGTCAG
GAAGGTGCCT ATGTCGACTC CACGCGCTTT TCCTTTGGCC AGCGGTTGGC CTTTATGGAA
GCGGTGCTGA CCGGCATGGC CAAGGCGGCG GACGGCGCCT TGGGGGGCCG CCACACAGCC
TTCATCCTCA AGCAGATGAA AGGTGCGGGC GTGCATGTGC TGGGGGCCAA ATCCCATAAC
CTGTATCCCA AAGACACTCC GGATTCCCCG GAAATCAAGG CTGCCCTGGA GTGCCGCGCC
CTCAGTCCCG AATCCTGGGC GCTGGTGCGC GAAAACTTCC TGCGTGCCGG GGGTGGCCCC
GCCGCCAAGA CGGCGGTAAC CGAGCAAGTG CTGGAAATCG CCAAGCTGGG CGAGTTCCCC
CTGGAGGATT TTGCCTTAGG CGAACCGGTC GTACCCGCCA CAGCCATGGG CGCATTGGTG
GCCTGGGTGG GACAGCAGGA TCCGCGCTTT GTGGTGACCA ATGCCGACGG CAACGAAGCC
TCGGCCATGA AGAACATCAA TGACGCCCTG AAAATCCGCC ACCCCACGGA AGATCCGCTC
TATAACCAGC AACCCAGCGG GCAGGTCTAT GAACCCCTGA ACGAGGATGC CTGCGCGGGT
TTGGCGGCGG GACTGGCCCT TTTGGGCAGC CGTTCCTTGT GGCTGTCTTA TGAATCCTTT
GCCATCAATG GCTGGCCCAT CATGCAGACA GTCGCACAGG CGATGGCGGA ATTGCGGCGC
AAGACCCCAT CCACGGTCTG CATGTTCACC GCCGGAGCTC TGGAGCAGGG CCGCAACGGT
TGGACCCACC AGCGCCCGGA GATCGAGAAC TACTTTGCCG CTCAGATGCG CAACGGCAAT
GTCTTTCTGC TTTATCCCAC GGATGCCAAC GCCATTCAGG CCGCCTACGA GTACGCAGTG
AACAGCGTCA ACAAGTCGAT GGTCATTATC GCTTCCAAAA GTCCGATGCC GGTACGGCTG
ACCATGACAC AGGCGCGGGA GGCGGTGCGC AAGGGAGCGG CGCTCCTGCA TGATGCGGGT
ACGGGCAACC GTGGCACCGT GACCCTGGCA GTGACCGGCG ATATGGTCCT GCTACCGGTT
TTCGCGGCCA GTCAGGTGCT GGAGAAGGAG GGATACCGGG TGCGAATCCT GTCGGTGATC
AACCCCCGCC AGCTTTACCG CCCGGCAGAT GTGGCCGCGC ACACGGTTTC CGAGGCGGAT
AAGGGCTTCA TGTGCGACAC CGACTTCCAC GACCTCTTCA TCGGGGAGGT GCTGCTAGGT
ATCAGCGGCG GTACTTCCGG GGCGCTGGAG CCGGTGCTGC TGCGCAGCCG GGCATGGCAG
CGCGATGTGC TGGCCTGGTT GCGCGGTGAG ACCACGGCCA CCCCGGCCGA ACTCATGGCC
TTCAACGGGA TTACCGTCGA GAGCATCGTC AATAAAATCC ACGGCCTCGA CGCCGGATAA
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| Protein sequence | MTAHTALPAN APAFCAGMFH FGESWPNFQE YGRSAAIATG RKAIPNPAAM EAVYQTLLMA
DALRYCTLQI CAAKSSGHPG GFASSTEAYA ALVMLGHTNI VTEVGHHAPG FYSAMFLDCS
LEEMGIRDMN DMMARFREQH GLLGHLSGAI PGLLAPAGPL GQGQHFAMAG ALLHPGTLFP
VTIGDGGFGE PYVLSAMKHF HFAYPRVTNY LPVLVWNGFS QEHHSMVSLM TNDEMIAYWR
AHDFDEVILV DAKNFDDAGQ EGAYVDSTRF SFGQRLAFME AVLTGMAKAA DGALGGRHTA
FILKQMKGAG VHVLGAKSHN LYPKDTPDSP EIKAALECRA LSPESWALVR ENFLRAGGGP
AAKTAVTEQV LEIAKLGEFP LEDFALGEPV VPATAMGALV AWVGQQDPRF VVTNADGNEA
SAMKNINDAL KIRHPTEDPL YNQQPSGQVY EPLNEDACAG LAAGLALLGS RSLWLSYESF
AINGWPIMQT VAQAMAELRR KTPSTVCMFT AGALEQGRNG WTHQRPEIEN YFAAQMRNGN
VFLLYPTDAN AIQAAYEYAV NSVNKSMVII ASKSPMPVRL TMTQAREAVR KGAALLHDAG
TGNRGTVTLA VTGDMVLLPV FAASQVLEKE GYRVRILSVI NPRQLYRPAD VAAHTVSEAD
KGFMCDTDFH DLFIGEVLLG ISGGTSGALE PVLLRSRAWQ RDVLAWLRGE TTATPAELMA
FNGITVESIV NKIHGLDAG
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