Gene Lferr_1315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1315 
Symbol 
ID6877289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1276984 
End bp1277265 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content56% 
IMG OID642789190 
Productprotein of unknown function DUF497 
Protein accessionYP_002219757 
Protein GI198283436 
COG category[S] Function unknown 
COG ID[COG2929] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000162456 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGTTCA CTTGGGACGA CAAAAAGCGG CAGACCAACC TGTGCAATCA TCGCGTGGAC 
TTTGCCGATG CCGTCGGGGT CTTTTTTGAT GACTGCGCCC TGACCACGGA GGATGTGGAT
GCCGAAGGTG AGCAGCGTCT GGTGACGATG GGGCGGGACT TCTTGGATCG AGTACTGCTC
GTGGTGTACA CCGAGCGCGG TGAAGATGAA ATACGCCTCA TATCCGCCCG TAAAGCCAGC
CCAGGAGAAC GCAAAGCATA TGCAGGAGGT GCGAACCCAT GA
 
Protein sequence
MKFTWDDKKR QTNLCNHRVD FADAVGVFFD DCALTTEDVD AEGEQRLVTM GRDFLDRVLL 
VVYTERGEDE IRLISARKAS PGERKAYAGG ANP