Gene Lferr_1276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1276 
Symbol 
ID6877250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1237205 
End bp1238113 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content58% 
IMG OID642789154 
Producthypothetical protein 
Protein accessionYP_002219721 
Protein GI198283400 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0779925 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTGG ACTTGAGCCG ACTCCATTCC AGCGACTTCA TCCACCTGGC CAGCAATGAG 
GAGTTCGGCG CAGCTGTAAA GCTATGGACC GAATCCATGC GGCAGGTACC TGCTGGTAGC
CTTCCCAACG ATGACAAGAT CCTGGCGTGC CTCGCTGGAT ATCGGGGTTC TCCCCGGCGG
TGGATGAAAG TCAAGACTAT TGCACTGCAT GGCTTCTCCC TTTGCTCCGA TGGCCGCCTG
TACCATCCCG TGCTTGCGGA AATGGTACTG GATGCCTGGG GCAACAAGAC CCAACAGCCG
ACATCAAGCC CCTCGGACCC TCGCGCCAAG GATCGTGAGC GCCTTCGCCG CTGGCGGGCG
GCACAGAGGG CCAGGCAGGA AAACGGCCAG CATATCAGAA CAGAGGAAGC GCACTCTACC
CAGACCGATG AAACGATTGA AACGTTTCAA GGCCGTTTCA CTGAAACGTT TCCTGAAACG
GCTGAAACGT TTCATAGAAA AGAAGGAGAG GGAGAAAAGA GAGAGAGAAG AAACGTTAAT
AACGTTTCCG AAACGGCGGG TGAAACGTTT CAGGAAACGC CACCCACAGA GCCCTCTCCA
CTGCCGACTG CAACCCGCGA AGGCACGTTG TGCAAGAAAC TACGGGGGCT TGGCGTCCGT
GCGGCCCCTC ACATGGTTGT TGTGCAGGAG ATGTGCGCAC GCCATACCGA CGAACACATC
CTGGCCGCGG CGGAGATCGC CCTGGAGAAA AAAGGCAGCG GCATCCACGT CGGCTACATC
GCCGCGATGC TGAAAGACGC TGGGAAATCT TCAGGGAAGG GAGGAAAGAA CAAGCCGGCA
GCGGGGCCGC CCAACCGCTC TCTCCTGCCG CCCGTCGCTG TTGCCGAATC TCATTATGTC
AGACTGTAG
 
Protein sequence
MKLDLSRLHS SDFIHLASNE EFGAAVKLWT ESMRQVPAGS LPNDDKILAC LAGYRGSPRR 
WMKVKTIALH GFSLCSDGRL YHPVLAEMVL DAWGNKTQQP TSSPSDPRAK DRERLRRWRA
AQRARQENGQ HIRTEEAHST QTDETIETFQ GRFTETFPET AETFHRKEGE GEKRERRNVN
NVSETAGETF QETPPTEPSP LPTATREGTL CKKLRGLGVR AAPHMVVVQE MCARHTDEHI
LAAAEIALEK KGSGIHVGYI AAMLKDAGKS SGKGGKNKPA AGPPNRSLLP PVAVAESHYV
RL