Gene Lferr_1142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1142 
Symbol 
ID6877115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1113343 
End bp1114479 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content62% 
IMG OID642789020 
Productglycosyl transferase group 1 
Protein accessionYP_002219588 
Protein GI198283267 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.696085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAAA CCGCGATGCG GGTCACCCTG GTTACGGAGA CCTACCCGCC CGAGATCAAT 
GGGGTGGCCA TCACCCTGGG GCGCGCCGTC GAGGCCTTGC AGGCCCGAGG CCATGAGGTC
ACCCTCATCC GTCCGCGACA AGCGGGGGAA TCCCCGAGTC CGGGCCTCAT GCCCGCGCTG
CCCCTCTTTT TTTACCGCCA GGTGCGCATC GGGTGTGCCA CCCCTATCAC CCTGCAGCGC
TGGTTGCGGG ATTGGGGCAG CGAGATCGTC CATATCGCTA CGGAAGGTCC TTTGGGCCTC
GCCGCCCTCA TCGCCGCACG GCGTCTGCAC ATTCCCGCGG TAACCAGCTT CCATACCAAT
TTTGATCAGT ATGCCGCACA TTACGGGTTA TCCCTGCTGG GCCACGGGGC GAGAATTTAT
CTGCGCGCCT TTCATAATGC GGGCAAACTC ACGCTGGTTC CCAGCCAGAG CACATTGGAT
CGTCTGCAGG CGCAAGGATT TCAGCAATTA CGCCGTTGGG GTAGAGGCGT GGATACCGTG
CGTTTTCATC CCCAATGGCG GGACGATGCG CTGCGGGAAA GCTTGGGCCT GGGGCCGGAG
GGCCGACTCT TGCTGTATGT GGGGCGACTG GCTCCCGAAA AGAATCTCAC ACCGCTCATC
ACTGCCTTTC GCACATTGCG CCGGAACGGT CTCACAGCGG TGCTCGTGCT GGTGGGCGAC
GGTCCCTTGC GCCCAGGGTT CAGCCGCCTC TCCCAAGAAG GCATTCTCTG TGTCGGCATG
CAGCAGGGCA TGGATCTGGC GCGCTGGTAT GCCAGCGCCG ATCTGTTCTG CTTCCCCTCC
TGCAGTGAAA CCTTCGGGAA TGTGGTGCTC GAAGCCGAAG CCAGCGGCCT GCCGATCCTC
GCTTATGATT GCCCTGGGGT GAACGAACAG GTGAGTGATG CGGTTCATGG ACTGCTCCTG
CCTCCGGGCA GTGACTGGGC CCCCATGTTA CAACTCCTCA GCAAGGATTC CGGTCTCCGC
CAAAAGTTCG GTGCGGCCGG TCGTCTGCGG GCCGAATCCC AGAGCTGGGT GCACAGTTTC
GACGTGCTCG AAGCCGCCTA TCGCGAACAA CTAGGATCCG AACCTGCTCC GCCGTAA
 
Protein sequence
MTETAMRVTL VTETYPPEIN GVAITLGRAV EALQARGHEV TLIRPRQAGE SPSPGLMPAL 
PLFFYRQVRI GCATPITLQR WLRDWGSEIV HIATEGPLGL AALIAARRLH IPAVTSFHTN
FDQYAAHYGL SLLGHGARIY LRAFHNAGKL TLVPSQSTLD RLQAQGFQQL RRWGRGVDTV
RFHPQWRDDA LRESLGLGPE GRLLLYVGRL APEKNLTPLI TAFRTLRRNG LTAVLVLVGD
GPLRPGFSRL SQEGILCVGM QQGMDLARWY ASADLFCFPS CSETFGNVVL EAEASGLPIL
AYDCPGVNEQ VSDAVHGLLL PPGSDWAPML QLLSKDSGLR QKFGAAGRLR AESQSWVHSF
DVLEAAYREQ LGSEPAPP