Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1107 |
Symbol | |
ID | 6877078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 1082491 |
End bp | 1083249 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642788987 |
Product | beta-lactamase domain protein |
Protein accession | YP_002219556 |
Protein GI | 198283235 |
COG category | [R] General function prediction only |
COG ID | [COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGTGG TTTTCCTCGG TACGGGATCC AGTGCCGGAA CCCCGGTGAT TGCCTGCCAC TGCCCGGTTT GTTGTAGCGA CGACCCGCGC AATCACCGCC TGCGGGCCAG TATCCTGGTG CGGGATGAAG GCGTTGATCT GCTGGTGGAT ACCGGTCCTG ACCTGCGTCA GCAGATGCTG CGTGCCGGCG TGCAGTCGCT GACGGCCGTG CTCTATACCC ATTTTCACGC CGATCATATC AATGGGGTTG ACGATCTGCG CGCCTTCAAT TTTGCACAGG AGGTCGTGAT CCCCTGCTAT GCGGATGAGC GCACGGCAGC GGAGCTGGAG AGCCGTTTCC GCTATTGTTT TCTGCCGCCG GATCCGGCCT GGGCGAAACC TTCCCTGTCC ATGCACCGGA TCGTATCGCC GCAGACCTTT GGCGGGGTTC GGGTGACGCC CATACCCGTG CTGCACGGTG ATCTACCCAT ACTCGGGTAC CGTTTCAATG ATGTGGCGTA TCTGACGGAT CTGAAAACGA TTCCAGACGC CAGCCTAGAG CTGCTGCGGG GTTTGAAAGT GTTGGTCCTG GATTGTCTGC GTTATGAATA TCACCCCACC CATCTGCATG TCGAAGAGGC CCGGTACTGG GCGCGCCGGA TTGGCGCGGA ACGGACCATT CTTACTCACA TGACCCATGA CGTGGATTAC GCGACATTGG CGGCGGAGTT GCCGGAGGGC GTCATTCCCG CCAGTGATGG TATGGTCCTG GACCTTTAG
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Protein sequence | MKVVFLGTGS SAGTPVIACH CPVCCSDDPR NHRLRASILV RDEGVDLLVD TGPDLRQQML RAGVQSLTAV LYTHFHADHI NGVDDLRAFN FAQEVVIPCY ADERTAAELE SRFRYCFLPP DPAWAKPSLS MHRIVSPQTF GGVRVTPIPV LHGDLPILGY RFNDVAYLTD LKTIPDASLE LLRGLKVLVL DCLRYEYHPT HLHVEEARYW ARRIGAERTI LTHMTHDVDY ATLAAELPEG VIPASDGMVL DL
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