Gene Lferr_0996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0996 
Symbol 
ID6876964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp967261 
End bp967665 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content59% 
IMG OID642788877 
Productheat shock protein Hsp20 
Protein accessionYP_002219449 
Protein GI198283128 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000618844 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCGATC TGGAAGACAT TATGTGGATG CAAGCCATAG ACATGTTGGA GCGTGCGGAA 
CGCTTGCAGC GGCGCTTCTT TCAGCCGGCC CCGTCGGGTC GCCAGCCAGC CTGGCAGCCG
CCCATGGATG TCTTTGAGAG CAGTGGTGGG CTGCAGATTG TCGTGGCATT GCCCGGCGTT
AGCCCGGAGG AGGTACAGGT AATCTTCAGC GGCAACGTCC TGATAGTGAG TGGTCAACGT
CGGCTTTCCG CAGAACTGCA AACGGGGCAT ATCCATCGTC TGGAGATCCC CTACGGCGTT
TTCGACCGGC GCCTGCAGAT TCCCGATGGC TTGACGTTGC AGGGCTGGGA AATGCGCGAT
GGCTGTCTCC ATTTGTCCTT TCGCCGGCAA AGGGGTATGA AATGA
 
Protein sequence
MRDLEDIMWM QAIDMLERAE RLQRRFFQPA PSGRQPAWQP PMDVFESSGG LQIVVALPGV 
SPEEVQVIFS GNVLIVSGQR RLSAELQTGH IHRLEIPYGV FDRRLQIPDG LTLQGWEMRD
GCLHLSFRRQ RGMK