Gene Lferr_0914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0914 
Symbol 
ID6876879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp876463 
End bp877887 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content52% 
IMG OID642788794 
Productpermease for cytosine/purines uracil thiamine allantoin 
Protein accessionYP_002219369 
Protein GI198283048 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1457] Purine-cytosine permease and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGACA GGCATTCGAT TAGTGCCACG ACAGAGGCGG AGCGCACGAG TTCAGCGCCG 
CGGGTCGCTT TGATCTGGCT AGCGGCGACC ATGACCGCCT CTAGCTTGCC GGTCGGCGTT
TTGATCGCCC AGTTGTTTCC TATGGCGCCA TTTCTGTGGG TAGTTCTGCT GGCATCTGCG
CTTTTTGCTG CCGTGGGTAT CATCAGTATA CCGGGATTTG TCTACGGTAT TCCGACCATG
GCGGTTTCTG CGCGCGTTTT TGGGAGGTCG GTCAATAAAC TGATTTCGTT GAGTAACTGG
ATGTCCCAGT TGGGTTGGCA GGCCGTGGTG TTAGTGCTTG TGGTTTATAT CCTTCGCAGT
GTCTTTGATA GTTACAGTTT TTTACCTGCA AATACTAGTA TTTATTACGC GCTGGTATTG
GCTGTGTTTG GTAATTTTGT GGTGCCAATT ATCGGGTATA GGGCCATCGT GACGGCGCAG
ACGGTGGGGG CGCTATTTCT CGCGCTGTTT GCGATGGCCA TACTGGTATA TCTACATGGC
GGGCAGGCTC TTTCGATGAC GCATGCTCTA GGCCGTTTTG ACGGACTTCA AACCCTGGGT
GGAATTGCCT TGGCGCTCAT GGGTGGTGCG TTCTCCTGGA CGATGTTTGC TTCGGATTAT
TCGCGGTATG TGCGGCGTGA CACGAGCCTG ACGCAAATGG CGTTATGGCC GAGCCTCGGC
GGATTTGCAG GCGGCGGCCT TATTCTCGCA TTAGCGATTA CGCTGTATGT GCATGGTGGT
GTCCAGGTAG GACCTGCCGG AATAAGCATC ACGGCGACCG GGCTGGGCAC TTCGGTACTG
TATTTAGGCT TTTGCACTTT TGCGATATTG GGGTTGTTGG CATCCAATTT CCTGAACTCC
TACAGTTCCG CTTTCAGTCT CGCGGTGGTA ATAGGTAAAG ATCTGGATCG CAAGAAATTT
ACGGTTCTGG ATGCCCTGCT GGCAACGTTC GTCGGTACCT ATATGCTTTT TGTGGCGCCG
TCATTCTGGG AATCTTTTCA AACCTTCCTG GATTTGCTGA TTATTGTCGC GGCGCCGTGG
ACCGGTGTGA TGATCATCTA CGTGCTGTGG GACGTGCTTC CGGAAGCACG CGGAGGGTTG
AACAGACAGT TAGCTAGGCG TGCTAATGTA TGGGTTCTCG CCATGGGGAT CGCGGTTACC
GTATTGTTCT CCAATAATCC GATTTGGGAG GGATATGGAG CGCATCTATT GCATGGTACA
GATATATCTC CATTGGTGGG TGTCGCGACG ACGATTGTGG CATCAATACT CTACCGGGTT
TTGTTTTGTC ACTATACGGC CGCTGATGAG CAGGGGCAGG TGTGCGCGTT ATCCATACCG
GTTGTTAGTA AAATTACCGA TGAAGGTGCC AACGGGTACA GATGA
 
Protein sequence
MGDRHSISAT TEAERTSSAP RVALIWLAAT MTASSLPVGV LIAQLFPMAP FLWVVLLASA 
LFAAVGIISI PGFVYGIPTM AVSARVFGRS VNKLISLSNW MSQLGWQAVV LVLVVYILRS
VFDSYSFLPA NTSIYYALVL AVFGNFVVPI IGYRAIVTAQ TVGALFLALF AMAILVYLHG
GQALSMTHAL GRFDGLQTLG GIALALMGGA FSWTMFASDY SRYVRRDTSL TQMALWPSLG
GFAGGGLILA LAITLYVHGG VQVGPAGISI TATGLGTSVL YLGFCTFAIL GLLASNFLNS
YSSAFSLAVV IGKDLDRKKF TVLDALLATF VGTYMLFVAP SFWESFQTFL DLLIIVAAPW
TGVMIIYVLW DVLPEARGGL NRQLARRANV WVLAMGIAVT VLFSNNPIWE GYGAHLLHGT
DISPLVGVAT TIVASILYRV LFCHYTAADE QGQVCALSIP VVSKITDEGA NGYR