Gene Lferr_0904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0904 
Symbol 
ID6876869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp866814 
End bp867329 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content57% 
IMG OID642788785 
ProductATP synthase F1, epsilon subunit 
Protein accessionYP_002219360 
Protein GI198283039 
COG category[C] Energy production and conversion 
COG ID[COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) 
TIGRFAM ID[TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.112177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAGA ACAGAACATT CCGCTTGAAT GTTGTCGATG TCCACGGCGA AGTCTACACC 
GGTATGGCGC GTTTTGTGGC GGTGCCGGCG GAACTGGGTG AGATCGGTAT TCTGCCGGGG
CATGCGCCCC TGCTGTCCGG GCTGCGGCCC GGCGAGTTAC GCATTACCCA GCCCGACGGC
CAGACGCAGA TTCTTTTTCT GGAAGGTGGA ATGCTGGAGA TTCAACCCGA TATCGTAACC
ATCCTCGCCG ATGCCAGCCT GCGGATTTCG GATATCAACA TTCACGAAAG CAGGGAACGC
ATCAAAGACG CACAAAGTAC GTTGGCGAAA CGTGCGGTTC CGGCGATGGA TTTTGCCCGC
GCCGAACTGG AGTTGCAGCG GGAAGTGGCA AAATTGCATG CGTACCAGCG CTACCAGATA
CATGAACAAC GGGGTGGCGG TACGGGCAAT TATAATTGGG AGCGCCCAGC CCTGCAGAAT
GTGCCGAAGG TGAACGTGCA GGAGCTGGAG GATTGA
 
Protein sequence
MQQNRTFRLN VVDVHGEVYT GMARFVAVPA ELGEIGILPG HAPLLSGLRP GELRITQPDG 
QTQILFLEGG MLEIQPDIVT ILADASLRIS DINIHESRER IKDAQSTLAK RAVPAMDFAR
AELELQREVA KLHAYQRYQI HEQRGGGTGN YNWERPALQN VPKVNVQELE D