Gene Lferr_0757 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0757 
Symbol 
ID6876721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp717275 
End bp718084 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content61% 
IMG OID642788638 
ProductABC-3 protein 
Protein accessionYP_002219214 
Protein GI198282893 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.422432 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.510372 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTCCA GTTTCATGAT CAATACCTGG ATTGCCGCCA CCGCCATTGC TTTTGTCGCT 
GCTTTCATCG GCTTTTTTGT GGTGGTACGG CGCTCCGCCT TTGCCGCCCA TGCCTTGCCT
CTGGGCGCTT TTCCGGGGGC GGCGGCGGCC AACCTGCTGG GAATCGATCC GTTGATCGGG
TTGCTGGTTT TTGTTGGAAT GGGGGTTTTA CTCCTGCGCC AATTGGTGCG CATGGGGCGC
CGCGATGTGG GCACCGGGCT GCTGCTGGTG CTGTTTCTGG GGGTGGGTGC ATTGTTGCTC
AGTATGACCA GTGCGTATGC ACCGGCGGTG TTTTCCCTGC TCTTCGGCGA GGTGCTGGGG
GTCAGCGACG CCGATTTGTG GCCCATACTG GGCATCTGCG CGCTGGTGGT TGTGGGCATC
GCTCTGTATT TTCGGCCTCT CTTGCTGGAC TCGACTTTTC CCGATCTGGC GGCCTTGCAG
GGGATTCGCG CCGCACGCAT GGATCTGGTG TTCCTGACCC TGCTGGCCCT GGTAACTGCC
ACGGCCTTGC CGGTGGTGGG GGCCTTTCTG GTGTTCACCC TGCTGGTCGG CCCGCCGGCC
GCCGCCCAGG TGTTGAGCGG CAATCCCATG CGCGTGCTGG TGCTGTCCGT GGTTTTTGCA
GAGGGCTGCA TCTGGAGTGC TATCGCACTC TCCTACTGGA CCAACTGGCC CATCGGTTTT
TTTGTCGGGA CCATCGGTGC GGGCTTGTTT ACGGTGGCGC GTTCTTACCG GCACTGGAAT
CAGCGGCAGC GCAATTTCGT GGCGCTATAA
 
Protein sequence
MFSSFMINTW IAATAIAFVA AFIGFFVVVR RSAFAAHALP LGAFPGAAAA NLLGIDPLIG 
LLVFVGMGVL LLRQLVRMGR RDVGTGLLLV LFLGVGALLL SMTSAYAPAV FSLLFGEVLG
VSDADLWPIL GICALVVVGI ALYFRPLLLD STFPDLAALQ GIRAARMDLV FLTLLALVTA
TALPVVGAFL VFTLLVGPPA AAQVLSGNPM RVLVLSVVFA EGCIWSAIAL SYWTNWPIGF
FVGTIGAGLF TVARSYRHWN QRQRNFVAL