Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0710 |
Symbol | lspA |
ID | 6876672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 669862 |
End bp | 670320 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642788590 |
Product | lipoprotein signal peptidase |
Protein accession | YP_002219168 |
Protein GI | 198282847 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0597] Lipoprotein signal peptidase |
TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00000108511 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTGCGCT ATTTATGGTT ATCGTTCGGG GTCATCCTGC TGGATCAGGG CGTCAAACTC TGGCTGAGCC ACATCTGGCG GGTGGGGCAG GGCCTTGTCA TCATTCCGGG GCTGCTCAAT TTTCGTCTCG TCCACAACAC CGGTGCCGCC TTCAGCTTTC TGGCGGGGGC TGGCGGCTGG CAACGCTGGC TGCTCATCGG CGTCGCCCTG CTGGTGGTGG TGGTCATCGT CGCCATCCTG CGTCGGCTCA AGCCCGGCGC CACCTGGACC GCCATATCCC TTGCCCTGAT TCTCGGCGGT GCGGTGGGCA ACCTGATCGA CCGGATCCGC CTCGGCTATG TGATCGATTT TATTGGCGCC CACTGGGGCA GCCTCTACTG GCCCTACTTC AACATCGCCG ACAGCGCCAT CTCCATCGGA GCCGTGATAC TGGTCCTGGA CGCTTTCCGG CGCCATTAA
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Protein sequence | MLRYLWLSFG VILLDQGVKL WLSHIWRVGQ GLVIIPGLLN FRLVHNTGAA FSFLAGAGGW QRWLLIGVAL LVVVVIVAIL RRLKPGATWT AISLALILGG AVGNLIDRIR LGYVIDFIGA HWGSLYWPYF NIADSAISIG AVILVLDAFR RH
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