Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0647 |
Symbol | |
ID | 6876609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 606264 |
End bp | 606950 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642788529 |
Product | protein of unknown function DUF374 |
Protein accession | YP_002219107 |
Protein GI | 198282786 |
COG category | [S] Function unknown |
COG ID | [COG2121] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.483931 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGGCTGG AAGGGCGTTC CTTACGCGTG GTGGCCGCAC TCGCGGCTTA TATCATCAAA GGTATGGCCC TCAGTGTGCG CTGGCACGAG GAGGGGGATG CCAGCGTGCG CGCCCTGATC GAGGCCGGAC AGCCTTTCCT GCTGGCCTTC TGGCACGGGC GGGGTGTTAT GGTCGCCCAG GCCTACCGGC GAGTGGGCGG CCGTAGGATA AAAATCCTTG TCAGCGAACA TCGGGATGGC GAGCTGATTG CTGCCACCAT GGCACACTGG GGTTATGGTG CGGTGCGCGG GTCGACCCGG CGCGGGGCGG TCAGGGGCGC ACGAGGGATG CTGCGGGCCG CCCATGCGGG GTACGACCTC GCCATCTCCC CCGACGGTCC GCGCGGTCCC CGCGAAGTGC TGCAAGAGGG CGTTATCGAA TTGGCGCGCA TTTCCGGTCT GCCCATCGTG CCGGTCACCT ATTCGGCCCG CTGGGCGAAA CGCTTTGCCA GTTGGGATGG TTTTCTGCTG CCCCTGCCGG GCGCGCGTGG GGTGATCCTC TGGGGCGAAC CGCTGCGGAT CCCGCGCGAC GCCGATACGG ATACCCTGAT CGCTTTGCAG CAGGCGCTGG AGGCTGAGAT GATTGCACTG CGGCAACGCG CTGATGCTAT GGTTGGCCGG ACAGAACCGA CAGGCGGGAG ATCATGA
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Protein sequence | MRLEGRSLRV VAALAAYIIK GMALSVRWHE EGDASVRALI EAGQPFLLAF WHGRGVMVAQ AYRRVGGRRI KILVSEHRDG ELIAATMAHW GYGAVRGSTR RGAVRGARGM LRAAHAGYDL AISPDGPRGP REVLQEGVIE LARISGLPIV PVTYSARWAK RFASWDGFLL PLPGARGVIL WGEPLRIPRD ADTDTLIALQ QALEAEMIAL RQRADAMVGR TEPTGGRS
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