Gene Lferr_0647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0647 
Symbol 
ID6876609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp606264 
End bp606950 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content66% 
IMG OID642788529 
Productprotein of unknown function DUF374 
Protein accessionYP_002219107 
Protein GI198282786 
COG category[S] Function unknown 
COG ID[COG2121] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.483931 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGCTGG AAGGGCGTTC CTTACGCGTG GTGGCCGCAC TCGCGGCTTA TATCATCAAA 
GGTATGGCCC TCAGTGTGCG CTGGCACGAG GAGGGGGATG CCAGCGTGCG CGCCCTGATC
GAGGCCGGAC AGCCTTTCCT GCTGGCCTTC TGGCACGGGC GGGGTGTTAT GGTCGCCCAG
GCCTACCGGC GAGTGGGCGG CCGTAGGATA AAAATCCTTG TCAGCGAACA TCGGGATGGC
GAGCTGATTG CTGCCACCAT GGCACACTGG GGTTATGGTG CGGTGCGCGG GTCGACCCGG
CGCGGGGCGG TCAGGGGCGC ACGAGGGATG CTGCGGGCCG CCCATGCGGG GTACGACCTC
GCCATCTCCC CCGACGGTCC GCGCGGTCCC CGCGAAGTGC TGCAAGAGGG CGTTATCGAA
TTGGCGCGCA TTTCCGGTCT GCCCATCGTG CCGGTCACCT ATTCGGCCCG CTGGGCGAAA
CGCTTTGCCA GTTGGGATGG TTTTCTGCTG CCCCTGCCGG GCGCGCGTGG GGTGATCCTC
TGGGGCGAAC CGCTGCGGAT CCCGCGCGAC GCCGATACGG ATACCCTGAT CGCTTTGCAG
CAGGCGCTGG AGGCTGAGAT GATTGCACTG CGGCAACGCG CTGATGCTAT GGTTGGCCGG
ACAGAACCGA CAGGCGGGAG ATCATGA
 
Protein sequence
MRLEGRSLRV VAALAAYIIK GMALSVRWHE EGDASVRALI EAGQPFLLAF WHGRGVMVAQ 
AYRRVGGRRI KILVSEHRDG ELIAATMAHW GYGAVRGSTR RGAVRGARGM LRAAHAGYDL
AISPDGPRGP REVLQEGVIE LARISGLPIV PVTYSARWAK RFASWDGFLL PLPGARGVIL
WGEPLRIPRD ADTDTLIALQ QALEAEMIAL RQRADAMVGR TEPTGGRS