| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0645 |
|---|
| Symbol | |
|---|
| ID | 6876607 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | + |
|---|
| Start bp | 605239 |
|---|
| End bp | 605859 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642788527 |
|---|
| Product | MotA/TolQ/ExbB proton channel |
|---|
| Protein accession | YP_002219105 |
|---|
| Protein GI | 198282784 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0811] Biopolymer transport proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.557109 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAAGAGT TGCTGGGATT GTTCAAGTTA GGCGGATTTG TTCTGCCGAT TCTCATTTTG
GCGGCAATCG TCGCTTTGGC CATCGCCGGT AATCGTCTCT GGGTCTTGCG GCGGGGACGT
ATTGCACCGC GTGATCTCGC GCCCCGGGTC GGGGAACTGG TGGACGCGGG CAAGGTGCAG
CAGGCCGTCA AGGTGCTGTA TGAAAACGAC ACGCCCCTGG CCAGGATGAT GTTGGTGGCG
CTCCAGAGCG CGGGACAACC GCGCGACGTG ATCAAGGAGT CGGTGGAAGA GACCGGCCGT
CATGAAGTGG CGCATCTCGA TCGATACCTC AACTTTCTGG GTAGTATCGC CGGTGTGGCG
CCCTTGCTGG GTCTGCTTGG AACCGTATTC GGCATCATGC ATGCTTTTGC GGCTATCGGC
ATGGTGGGCG CGGGCGATCC CAAGGCGTTG GCGAGCGGCA TCGCCGAGGC GCTCATCACC
ACCGCCAGCG GTCTTATCGT CGCTATCCCC AGCCTGATGT TCTATCGCTA TTTCAAAGGG
CGGGTCGATG CGCTGGTGTT GTCCCTCGAA AAAGAGGCGC TGAAGCTGGT GAATCAGATA
GCCGCGGGGA CGGAAAAATG A
|
|---|
| Protein sequence | MQELLGLFKL GGFVLPILIL AAIVALAIAG NRLWVLRRGR IAPRDLAPRV GELVDAGKVQ
QAVKVLYEND TPLARMMLVA LQSAGQPRDV IKESVEETGR HEVAHLDRYL NFLGSIAGVA
PLLGLLGTVF GIMHAFAAIG MVGAGDPKAL ASGIAEALIT TASGLIVAIP SLMFYRYFKG
RVDALVLSLE KEALKLVNQI AAGTEK
|
|---|
| |