| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0630 |
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| Symbol | |
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| ID | 6876592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 588945 |
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| End bp | 589898 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642788513 |
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| Product | RNA polymerase, sigma 70 subunit, RpoD family |
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| Protein accession | YP_002219091 |
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| Protein GI | 198282770 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02394] RNA polymerase sigma factor RpoS
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAACG CGATTGGAGA CGAGGATGAG GACGGGGGGT TTCCCGACGC ACCCCCGATC
TCGGAACAGG ACGAGGATGC TCCGGAAAAG ATCGATGGAG CGGAGGATTT CGGCGAGGCG
CCCGACTGGG ATGCCACCCG CTGTTATCTT CGGGAGATCG GACACCGTCC GCTGCTGACA
GCGGAGCAGG AAGTGACCCT GGGGCGCATG GTGCAGACTG GTGATCAGGC CGCGCGCTGC
ACCATGATAG AGAGCAATCT CCGCCTGGTA GTAAAGGTGG CGCGACACTA CCTCAACCGG
GGCTTGCCAC TTCTGGACCT GATCGAAGAG GGCAACCTCG GGCTGATCCG AGCGGTGGAG
AAATTTGATC CGGAGCGCGG CTTTCGCTTC TCTACCTATG CGACCTGGTG GATTCGTCAG
AATATCGAGC GGGCGCTGAT GAATCAGACC CGCACCATCC GTCTGCCCAT TCACGTGATG
AAGGAACTCA GCGCGGTGCT GCGCGCCACC CGCTGCCTCG CACAAACTCT GCAGCGGGAT
CCGACGCCGG AGGAGGTGGC AGAAGCTTTG GATCGCTCCG TCGACGCGGT TCGCGATTGC
CTGGAAATGG ATGGCCGGGT GACGAGCCTG GATATGCCCT ATGGCAAGGG GTCGGATCGT
TCCCTGGCCG ATCTGGTGGC AGACACTAAC GCGCCAGGCG TGGAGCAGCG GCTGGAGAAC
CAGAATCTTT CCCGGCAGGT GCACCAGTGG ATTGCGACCA TGACCGAAAA ACATCGCCTC
GTGCTGCTCT GGCGCTTCGG TCTGGACGGT ACGGACGGCG CGACGTTGGA AGAGGTGGGC
TCCCGCCTCG GCATCACCCG GGAGCGGGTG CGCCAGATTC AGGTGGAGGC GTTGCTGGTG
TTGCGCCATC GCATCGAAGC GGAAGGGTTG GCACCCGAGG GCCTGTTCGG CTGA
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| Protein sequence | MINAIGDEDE DGGFPDAPPI SEQDEDAPEK IDGAEDFGEA PDWDATRCYL REIGHRPLLT
AEQEVTLGRM VQTGDQAARC TMIESNLRLV VKVARHYLNR GLPLLDLIEE GNLGLIRAVE
KFDPERGFRF STYATWWIRQ NIERALMNQT RTIRLPIHVM KELSAVLRAT RCLAQTLQRD
PTPEEVAEAL DRSVDAVRDC LEMDGRVTSL DMPYGKGSDR SLADLVADTN APGVEQRLEN
QNLSRQVHQW IATMTEKHRL VLLWRFGLDG TDGATLEEVG SRLGITRERV RQIQVEALLV
LRHRIEAEGL APEGLFG
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