| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0607 |
|---|
| Symbol | |
|---|
| ID | 6876569 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 564810 |
|---|
| End bp | 565505 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642788490 |
|---|
| Product | protein of unknown function DUF502 |
|---|
| Protein accession | YP_002219068 |
|---|
| Protein GI | 198282747 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2928] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACTAC CCGTTCCCGC CAGCGAGAAA TCCCTCTTCC AGCGCATTCA CCTGCGCCGC
TGGTTCGTTC AGGGTTTACT CATCTCGCTG CCTATCGGGC TGACGGTTTA CGTGGTGCTG
TGGATTGGCG GCTGGCTGAA CAATCTTTTC GAGGCGCCGA TCAGAGCGAT TTTTGGTATC
GACATCCCCG GTCTGGGCCT GTTGCTGACG CTGCTGATCA TTCTCGGTGT CGGCTTCCTC
GCCTCCCACG TCCTGACCGC CTGGATTTTT GAAAAACTGA ACGCCGTGCT CGGGCGCATT
CCCGTATTGC ACAGCCTCTA CAGCACCATT CACGAAACGG TAGGCCTGCT GTTTGGCGGA
ACGGACCGCG GTTTCCGCAG CGCCGTGCTG GTGCGCCAGG GTGGTGACAT GGGCTATATC
ATCGGTCTGA TCACGCGCGA CGCCCTCAGC GAGTTGCCGC ACCTGCCCGA GGATTGCGTC
GCGGTATTTA TCCCCATGAG CTACGGCATC GGCGGCTTTA CCTGCCTCGT GCCACGCGAC
AAAGTCATCC CCCTGCCCGA CCTCACCCCG CAACAGGCCC TGCGCTTCGC CATGGCGGGC
GGGGTGGGCG GCGGAAAAGC CATCCGCGAA AAGCCTGGCG GCGGCTCTGA ATCAGCCAGA
CCGGCGGCAG GCCGTCATCC GGAACCGGAC CGATAA
|
|---|
| Protein sequence | MTLPVPASEK SLFQRIHLRR WFVQGLLISL PIGLTVYVVL WIGGWLNNLF EAPIRAIFGI
DIPGLGLLLT LLIILGVGFL ASHVLTAWIF EKLNAVLGRI PVLHSLYSTI HETVGLLFGG
TDRGFRSAVL VRQGGDMGYI IGLITRDALS ELPHLPEDCV AVFIPMSYGI GGFTCLVPRD
KVIPLPDLTP QQALRFAMAG GVGGGKAIRE KPGGGSESAR PAAGRHPEPD R
|
|---|
| |