Gene Lferr_0562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0562 
Symbol 
ID6876524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp527445 
End bp528242 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content65% 
IMG OID642788445 
Producthypothetical protein 
Protein accessionYP_002219023 
Protein GI198282702 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCACC CGGGACGCCA AAGTCGGCCG CGGGAACGCC GCGCCGCCAT CTGGTGGAAT 
GGCCGCAGCG GCCGCCTCCT GCTCGACCGT GCCCGGGATA TGCTGCCGCG CTGGATAGAA
CGCCTGCAAC CGGAGACCAT TCTGCAGCTC GGGCAACCCG TTTTCTGGGG ACTGCCGCCC
GGCCACGAGC ATACCTGGGT ATTGCTCAAT GACGGCTTTG CCCTGCCTTC CGACGAGTAT
CTGCAGGCCT ATGGCGTCTG TGAGGCGATG CCTTTCGCCG CCATGCGTTT CGACCTGGTC
ATCGTCCCAT TCTGTCTGAC CCGCATGGCC AATCCGCAGG CGGTGCTGGA GGAGTGCTGG
CGGGTCCTGC GTCCCGAAGG CCATGTGCTG ATCATGGATT TCAATCCGGG GGGGAGCCTG
AGTGTGGTAC GCCGTTGGCA TCTCTGGCGC AGGGATCGTG CCTGGCCATG GCTGCGCCCC
TTCCTGCCTC TGGGACGACT GCGCGGTCTG CTCGAGGAGC AGGGTTTCGT GCTCCGCGAG
GGACGTTATT TTCAATATAC CGTTCCGGGC CTGCGGCGCA ATGCGCAGTG GATGGAGCTG
GTGGGTGACC GCTGGTGGCC GGCAGGGGCC AACGCCTATC TGATACTGGC CCAGCGGCGG
GATCCCGAGC GGCCGCTGGT GGGCGCGGTC CGGTCGTTCA AGGTGCGTTC CGGGCGTCAG
AACGTCCGGT CCGAAGCCCC CGTTGCCTAT GTTGGTCCTG ATACTGAGAA CACCGCCCCA
TGCCCGAAAA AATCATAG
 
Protein sequence
MQHPGRQSRP RERRAAIWWN GRSGRLLLDR ARDMLPRWIE RLQPETILQL GQPVFWGLPP 
GHEHTWVLLN DGFALPSDEY LQAYGVCEAM PFAAMRFDLV IVPFCLTRMA NPQAVLEECW
RVLRPEGHVL IMDFNPGGSL SVVRRWHLWR RDRAWPWLRP FLPLGRLRGL LEEQGFVLRE
GRYFQYTVPG LRRNAQWMEL VGDRWWPAGA NAYLILAQRR DPERPLVGAV RSFKVRSGRQ
NVRSEAPVAY VGPDTENTAP CPKKS