| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0544 |
|---|
| Symbol | |
|---|
| ID | 6876500 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 501592 |
|---|
| End bp | 502170 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642788421 |
|---|
| Product | Smr protein/MutS2 |
|---|
| Protein accession | YP_002219005 |
|---|
| Protein GI | 198282684 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2840] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.39618 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00000321532 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGGGCGGC GGCGGCCGGA TCAGCCGGAG GAACAAAAGC GAGTGACCGG GGTGGACGAC
ACCGCTTGCT TTCTGCAAGC GGTAGCGGAT GTCCGACCTC TGCCAGCCCC ACCCCCTCCC
CCACGTCCAG CGCCGCCACC GCCCTTGCCG ATACAGCGGC ATCAGGACGA GTTGGCGGTT
CTTGAAGCGC TGGACGGTGG TCTGCACAGC GACGAAATTC TGGAATCCGG AGACGGGTGG
CTTTATTTAC GGCCCGGGCT GTCTCCGGCG CTGCTGCGGG ACTTGCGCCG GGGTCGGTTC
CGGATTCAGG AGCGGCTCGA CCTGCACGGC TGCACCGTGG AGGAAGGCCG AGCTGAACTT
TCAGCATTTT TGCGGGAAGC GCGACAGCGG CGCTGGACCT GCGTTTGCAT CATCCACGGG
AAAGGTCTGG GATCCCCCGG CCGCATTCCT GTCCTGAAAA GGCTGGTGGG TGGCTGGTTG
ATGCGTCATC AGGAAGTGCT GGCATTTGCT CAGGCGCGCC CAGAAGAGGG CGGCGGCGGC
GCATTGCGCG TTCTACTGGG CTGGCCCCGT CGCGAATAG
|
|---|
| Protein sequence | MGRRRPDQPE EQKRVTGVDD TACFLQAVAD VRPLPAPPPP PRPAPPPPLP IQRHQDELAV
LEALDGGLHS DEILESGDGW LYLRPGLSPA LLRDLRRGRF RIQERLDLHG CTVEEGRAEL
SAFLREARQR RWTCVCIIHG KGLGSPGRIP VLKRLVGGWL MRHQEVLAFA QARPEEGGGG
ALRVLLGWPR RE
|
|---|
| |