| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0467 |
|---|
| Symbol | |
|---|
| ID | 6876419 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 440240 |
|---|
| End bp | 440896 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642788340 |
|---|
| Product | Glutathione S-transferase domain |
|---|
| Protein accession | YP_002218928 |
|---|
| Protein GI | 198282607 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0625] Glutathione S-transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.336613 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.000569408 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCACTGG AACTCATCAG CTTTCCCCTC TGCCCTTACG TGCAGCGCTC GGTCATCACC
CTGCTCCACA AGCAGGTGGG CTTCACCCTC ACCCACATTG ATCTGGCGCA TAAACCGGAG
TGGTTTCTGG CCCTGTCGCC CCTGGGCAAA GTCCCCTGCC TGAAGATCGA TGAACACACC
GTACTTTTCG ATTCGCAGGT CATCAATGAA TATCTGGACG AAACCATCGC CCCCGTGCTC
CATCCTGCCG ACCCGCTGGA GCGGGCGCAG CACCGCGCCT GGATTGCCTT CGGCAGCGAA
ATACTGGGCG ACCAGATGCA GATGATGGTC GCTCAGGGAG AAGAGCGTTT TACCGCCGCC
AGTCGTCAGC TTTTTGACAA GCTGGAACGA TTGGATAAGG CCATGGGAAA CGGCGCCTTC
TTCGCCGGCG ACGACTTCAG TCTGATAGAC GCCGCATTGG CCCCCCTGTT CATGCGCATG
GAAATCCTCC ATGCCCTGCG CCCATTGCCG CGCTGGGAAT CCTTGGGCAA ACTGCGACGT
TTGACGGCAT TGCTCATGGA GCTGCCGGAA GTGGCGGGAT CGGTGACTGC GGACTTCCCC
GATCGTCTGC GCAACTATAT CAGTGAGAGA GGCAGTCTGT TTTTGCGTAC TGCCTGA
|
|---|
| Protein sequence | MPLELISFPL CPYVQRSVIT LLHKQVGFTL THIDLAHKPE WFLALSPLGK VPCLKIDEHT
VLFDSQVINE YLDETIAPVL HPADPLERAQ HRAWIAFGSE ILGDQMQMMV AQGEERFTAA
SRQLFDKLER LDKAMGNGAF FAGDDFSLID AALAPLFMRM EILHALRPLP RWESLGKLRR
LTALLMELPE VAGSVTADFP DRLRNYISER GSLFLRTA
|
|---|
| |