Gene Lferr_0445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0445 
Symbol 
ID6876397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp421061 
End bp421678 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content59% 
IMG OID642788318 
Producthypothetical protein 
Protein accessionYP_002218906 
Protein GI198282585 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000225244 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCAAAC AAAATACCGT GCAAGGAGTG CTGACAGGCA TGAGACGAGG TGGCGGCGGC 
GGAGGTCAGG GACGCGGGCA GGGCGGCATT CGTTTCGGGA ATGAGCCGGG CATGCGGCCT
GCCGGCATGA GCCTGGCCGA CGAGGAATCT ATGGAACAGC GGATGCTGGC GGGCACCGGG
GACACGGACA AAAGGGCACG TCACCAGCAC GATCAGGAGG TCTTTCATAC CCTGCTTCGC
CATCACGACC AGATTCAGCG TGAATTGACC CGGCTTCCCG ATGGCATACG TTCGCTGACG
ACCTCCGCCA ACCCGGAGAT CGTCGGCCTG CTACATGACC ATGTTCCAGC CATGCACCAC
CGGTTGGAAG AAAACTTTGG ATTGCGCTTC TGGGATCCAG CATTTCCAGA AATTTTCGCG
CAGCGCGAAA AAGTGCGAAT GGAAGTAACC CTGGTACCCA ATGGGGTTCT TGTGGAAGAG
ACCAGCGAGG ATCCGAACGT GGTGATCCTC ATTCAGGCCC ACGGCGCCGT CATCAACCTC
TTCGTGCAAC GCGGCTTTGC CCAGGCCCAG GAGGTCAGCC CCTTACCAGA CAACTATCAG
CGTGTACTGG GGGGTTGA
 
Protein sequence
MSKQNTVQGV LTGMRRGGGG GGQGRGQGGI RFGNEPGMRP AGMSLADEES MEQRMLAGTG 
DTDKRARHQH DQEVFHTLLR HHDQIQRELT RLPDGIRSLT TSANPEIVGL LHDHVPAMHH
RLEENFGLRF WDPAFPEIFA QREKVRMEVT LVPNGVLVEE TSEDPNVVIL IQAHGAVINL
FVQRGFAQAQ EVSPLPDNYQ RVLGG