Gene Lferr_0357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0357 
Symbol 
ID6876308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp334549 
End bp335322 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content65% 
IMG OID642788230 
Productexodeoxyribonuclease III Xth 
Protein accessionYP_002218818 
Protein GI198282497 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.462834 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.596536 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAATTG CGACCTGGAA CGTCAACTCC CTCAAGGTAC GCCTCCCCCA GGTGTTGGAA 
TGGCTGGGCA GCGAGCAGCC GGATGTCCTT TGTCTGCAAG AGACCAAGTT GGCCGATGCG
CGTTTCCCGG TGGCCGAGTT GGCGGATGCC GGTTATCGGG CGCTCTATCA CGGTCAACCG
ACGTATAATG GGGTTGCCAT ACTGAGCCGC ACATCACCCA GTGACGTCCG CTGCGACTGG
CCGGATGGCG GCGACGGGCA GGCGCGGCTG TGCGCCGCCA GCTTCGGCGA CCTGCGCGTC
GTCAACGTCT ATGTGCCCAA CGGCCAAGCC CTGGACAGCG ACAAGTATCC CTACAAGTTG
CAATGGCTGG AGCGCCTGCG CGGATTGATC GCCGGAGAAT TGCAGGGTTG GCCGCAACTG
CTGCTGGTGG GCGACTTCAA TATCGCCCCC GATACCCGTG ACGTTTACGA CGCTGCAGAG
TGGGGGGAGG GCATCCTCTG CTCGGCGCCG GAGCGGGCGG CGTTGGGTGC CCTGTTGGAA
CTCGGGCTGC ACGACAGCTA CCGCAAGATG CATCCCGACG CGCGGGCGTG GAGCTGGTGG
GATTACCGCG CAGCGGCGTT TCGGCGCAAT CAGGGCCTGC GCATCGATCT GATTCTGGCT
TCATCCCCCG TTCTCTCGCG CACGCGGGAG GTGGTCATCG ACCGTGCCGC CCGGGCGGCG
GAGCGTCCCT CGGATCACGC ACCCGTCTGC ATCACGCTGG AGAGCAGCGC GTGA
 
Protein sequence
MKIATWNVNS LKVRLPQVLE WLGSEQPDVL CLQETKLADA RFPVAELADA GYRALYHGQP 
TYNGVAILSR TSPSDVRCDW PDGGDGQARL CAASFGDLRV VNVYVPNGQA LDSDKYPYKL
QWLERLRGLI AGELQGWPQL LLVGDFNIAP DTRDVYDAAE WGEGILCSAP ERAALGALLE
LGLHDSYRKM HPDARAWSWW DYRAAAFRRN QGLRIDLILA SSPVLSRTRE VVIDRAARAA
ERPSDHAPVC ITLESSA