| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0289 |
|---|
| Symbol | |
|---|
| ID | 6876239 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | + |
|---|
| Start bp | 273095 |
|---|
| End bp | 273844 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642788161 |
|---|
| Product | protein of unknown function DUF262 |
|---|
| Protein accession | YP_002218750 |
|---|
| Protein GI | 198282429 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.409479 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGACA AAACACCAGC TAGCTTTTCA CTTAAAGAAA TTGCATTATG GCAGTTGTAC
AAATCATCTA ATTCTAATGA AATACGTATC GATACTCCGT CCCTGCAGCG CGGCTTGGTT
TGGGATCCCG CGCAGATCGA GATGTTTTGG GATTCATTGA TGCGTGGTTT TCCTTTTGGC
TCGATCGTGA TCGCTCGGCC TCTGCAGAAT CAAATACGGC AGAACGATAG TCCGGCGCCA
GATTACCACC TGCTTGACGG ACAGCAGAGG TGCAACGCCA TCACTTGGGG ATTTGTGGTA
GCCAACATCC CTGAAGCCAA AGAACAAATG CTCTGGCTTG ATCTACTCCC GGGTGACCGA
CTCAAAAACT CGACACGCAA ATACCTGTTC CGGGTTACGA CACGCGCACA TCCCTGGGGT
TTCGGACGGG ATGATGCGGG CTCTACGCTT GGAGTATGCG ATCGCCTTGA GTTTCTCGAT
CGTTGGAGAG AGCTACACGA CGATTGTTCG TCTGAAAATG CCAGCTGTGG CGATCAAGCG
ATACGCCCCT GCCAAACAAG TGCGTTCCCA AGGACTCCGT TTTGCCTGTA CCTGTTGCGG
ATCTCATCGA ATGCTTTAAC AAAGATGGTG GTCATATTGA CTGGGATGAG CTTGCAAGAC
GACCCATGGT TGAACAGGCG CAACGTTGGA AAAACATGGC TGTCAAATCC CTGGCAGAAG
ATCAACGCCG CTTCGTTGAG CGTGGGCTGA
|
|---|
| Protein sequence | MEDKTPASFS LKEIALWQLY KSSNSNEIRI DTPSLQRGLV WDPAQIEMFW DSLMRGFPFG
SIVIARPLQN QIRQNDSPAP DYHLLDGQQR CNAITWGFVV ANIPEAKEQM LWLDLLPGDR
LKNSTRKYLF RVTTRAHPWG FGRDDAGSTL GVCDRLEFLD RWRELHDDCS SENASCGDQA
IRPCQTSAFP RTPFCLYLLR ISSNALTKMV VILTGMSLQD DPWLNRRNVG KTWLSNPWQK
INAASLSVG
|
|---|
| |