| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0288 |
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| Symbol | |
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| ID | 6876238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 272042 |
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| End bp | 273073 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642788160 |
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| Product | transcriptional factor MdcH |
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| Protein accession | YP_002218749 |
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| Protein GI | 198282428 |
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| COG category | [K] Transcription |
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| COG ID | [COG2378] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.727683 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTAGCC AGGGACGCGG GGACACACTC CTACGCCAGT GGGAGATCCT GAAATGTCTG
CCCCGGCATG GGAATGGGAT GACGGCTGTT CAATTACAGC AGACTTTGCA TGACCGTGGG
TTTAAGGTCA GCAAACGCCA GGTGTTGCGG GATCTGGAAG TGTTGTCTGG TATTTTTCCA
TTGCTCTGCA ATGACAAGGG GCAACCCTAC GGATGGCGTT GGGGCGATAA TGCGGTGTGT
GACATACCGG GAATCTCCAT TGCAGAGGCC CTGTCACTGG CCATGACGGA GGAAGCCGTT
CGGCCTTTTC TGCCCTCCGC ATTGGCCCGG GTGATGCAAC CACAGTTCGC GCTGGCCAAA
AGGAAACTGC AGTCATTGGG ATCAGAACAC CTCTTTAATC GCTGGCAGGA TAAGATCGCA
AGCGTTCCGC CCACCATGCC ACTACTCCCG CCAGTTGTTG ATCCGGAAAT TCTGGGCACT
ATCCAGGAAG CCGTACTGCA GGAAATGCAG GTGGAGGTAG CGTATCGACG TCTGACCGCA
GACGTGGCAG AACCGATACG GCTTCATCCC CTGGGACTGA TCTTGCGAGG GAACATTATG
TACCTCGTGG CAACGGCATA TGACTATGAG GATGTGCGGT TGTATGCATT ACACAGAATG
TCTGGTGTGA CGATGCTGGA CAAACAACGG GAAATGCCCC AAGGGTTTTC ACTGGCACAA
TACCTGGAGG AAGGTCACGG CCACTTCAAG TCTGAAAACG GCCTTATAAG TCTGGAAGCG
TTAGTTTCAC AGGAGCTAGG GCAGATCCTT TTGGAAACGC CATTGTCACT GGATCAGGTA
ATAGAATCCT TAGATGATGG CTTCTTTGTA AAAGCAACAG TACCGCATAC ATGGCAGTTA
GAATGGTGGA TTCTTGGTCA ATCCATCAAC ATGACGGTCC TGGCCCCGAA AAAGATTTGC
GATCTGATAT TGCAGAACAT GGAAGGTTCA ATCGCTTTGA TGAAAAGCAA AAGAGATATC
TCGAGTCATT AG
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| Protein sequence | MGSQGRGDTL LRQWEILKCL PRHGNGMTAV QLQQTLHDRG FKVSKRQVLR DLEVLSGIFP
LLCNDKGQPY GWRWGDNAVC DIPGISIAEA LSLAMTEEAV RPFLPSALAR VMQPQFALAK
RKLQSLGSEH LFNRWQDKIA SVPPTMPLLP PVVDPEILGT IQEAVLQEMQ VEVAYRRLTA
DVAEPIRLHP LGLILRGNIM YLVATAYDYE DVRLYALHRM SGVTMLDKQR EMPQGFSLAQ
YLEEGHGHFK SENGLISLEA LVSQELGQIL LETPLSLDQV IESLDDGFFV KATVPHTWQL
EWWILGQSIN MTVLAPKKIC DLILQNMEGS IALMKSKRDI SSH
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