Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0287 |
Symbol | |
ID | 6876237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 270589 |
End bp | 272049 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642788159 |
Product | hypothetical protein |
Protein accession | YP_002218748 |
Protein GI | 198282427 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.753964 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGTTGT CCAAATCTCG CGTTATAGCG CATCTCCAGT GCCCCCAAAG ACTCTGGCTG CAAACCTATC ATCCTGAACT TGCCGAGGTG GATGGGGGTT CGCAGATGCG GATGAACGTG GGCACAACCG TCGGAGAGAT TGCACGAACC CTCTTTCCAG ATGGTCACCT GGTGGAAACG AATGATTTGC GTATAGCCCT TGCAGAGACT GCGTCATTAC TCCAATCTCC GAGCGGCCCA ATTTTTGAAG CCACTTTGCA GGCAGCGGGA ACACTGGTGC GTGTGGATAT TCTGCTGCCC CAGGCACATG GGTATCATCT GATCGAGGTG AAATCGGCTA CCCATATCAA GCCCTACTAC GCTCAGGATA CGGCCATTCA GACCTGGATA AGCCGCGAGG CAGGGGTGCC GGTCTTGCAG AGCAGCATCG CGACTATCAA CAATCAATTT GTTTACCCCG GCAACAGTAA TTACCAGGAA CTCTTCACAA TCGAGTCAGT GGATGCACTC ATTGCGCCGC TACTTCCTGA AGTACCGCAA TGGATCAGCG CTGCCCAGGC GACATTGGCG GGTGGAGAAC CAGATATAGT GCCTGGGAAT CAATGTGAAA CGCCATTCTC CTGTCCTTTT ATAGGATATT GCGAAAAAGA CCTGCCGAAT CCCCCAGAAT ATCCCGTTGC ATTACTGCCG CACGGTAGTA CCACTGCAGC GATTTTGAGC GCGGAAGGGT ATGAGGATTT GCGCCAGGTA CCGAAAAACC GGTTAAGCCA TCCCCTGTAT CAGCGTATCC GTCAGGCAAG TATGGATAAC AAAGCGTTCC TTGGCCCAGA AGCAGCAGAG ATTCTGCAAG CCTTACCCTA TCCACGATTT TATATAGATT TTGAAACCAT CAATCCGGCG ATTCCTATCT GGGCCAACTC ACGGCCCTAC CAGCAAATTC CCTTTCAGTG GTCCTGCCAC CGCGAAGACG CGGATGGCAG CATTACGCAT GACGCTTATC TTGCGGATGG ACAGGACGAC CCTAGACCTC ACTTTTTAAG CACACTACTG CTGGCGTTGA GGGATACGGG ACCCATATTG GTCTATAATG CCGGGTTCGA GAATGCCCGA TTGCGCGAAC TGGCAGAGCA ACTTCCGCAA CAATCACAGG CTGTACAATC CGTTCTGGCG CGGGTGGTAG ATCTACTGCC CATCGCTCGC GCTTATTACT ACCATCCCGC CATGAAAGGC TCTTGGTCCA TCAAGGCGGT TCTCCCGACT ATTGCTCCAG AGCTTGCCTA CGATGATCTT GAGGTAGCAA ATGGGGGTAT GGCACAGGAA GCCTTTATGG AGATGTTGAG CCCAGATGCA GACCCTCTGC GCAGAGAAGA GGTCCGTGCG GCACTGCTCA CTTATTGTGA ACGGGACACA CTGGCTATGA TCCACATTGC CCGGCACTTC AAGGGGGAAG CACATGGGTA G
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Protein sequence | MGLSKSRVIA HLQCPQRLWL QTYHPELAEV DGGSQMRMNV GTTVGEIART LFPDGHLVET NDLRIALAET ASLLQSPSGP IFEATLQAAG TLVRVDILLP QAHGYHLIEV KSATHIKPYY AQDTAIQTWI SREAGVPVLQ SSIATINNQF VYPGNSNYQE LFTIESVDAL IAPLLPEVPQ WISAAQATLA GGEPDIVPGN QCETPFSCPF IGYCEKDLPN PPEYPVALLP HGSTTAAILS AEGYEDLRQV PKNRLSHPLY QRIRQASMDN KAFLGPEAAE ILQALPYPRF YIDFETINPA IPIWANSRPY QQIPFQWSCH REDADGSITH DAYLADGQDD PRPHFLSTLL LALRDTGPIL VYNAGFENAR LRELAEQLPQ QSQAVQSVLA RVVDLLPIAR AYYYHPAMKG SWSIKAVLPT IAPELAYDDL EVANGGMAQE AFMEMLSPDA DPLRREEVRA ALLTYCERDT LAMIHIARHF KGEAHG
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