| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0276 |
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| Symbol | |
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| ID | 6876226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 261781 |
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| End bp | 262371 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642788150 |
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| Product | Type IV secretory pathway protease TraF-like protein |
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| Protein accession | YP_002218739 |
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| Protein GI | 198282418 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4959] Type IV secretory pathway, protease TraF |
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| TIGRFAM ID | [TIGR02771] conjugative transfer signal peptidase TraF |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAGAA TATCCGCCGC AATCGCTAAG CGGCTGCTCT GGTGGGGCGC ATGGGCGATC
ATCGGTGTCC TGGTGCTGAA TGCTGCCGTA GGGCTATGGA TGCAGTACCA GCATCTGGTC
TTCAACGACT CGACCTGCGA GCCGGTGGGC CTCTACCAGC TGCGCGGATC TCCTTATCCA
TTGCACCACG GAGAACTGGT CGAAGTCGAG ATTCCTGGCC CCGCCCATCA CGCCACCGTC
GCGGAAGGCC TGAAGTACCA CTGGTTTCCC GCTGGACAGC CGTGGATCAA AGAGATCGCC
GCCGTTCCCG GGCAGACCGT GCGGCTTACG AGATCCGGGG TCCGTGTAGA TGGGCACACA
CTGCCGAACT CCCGGGTGGA TCGCTGGACG CCCGGCCACC ATCACCGGAT TGTCCATTAC
CCTTTCGGCA CCTATCACCT GAAGCGTGGC CAGGTCTGGC TCTACGCCCC AGGAAACTAT
GCCTTTGACT CGAGCTATTA CGGCCCAGTC CCTGAATCCC ACATCCTGCA ACGGGTGGTT
CCCTGGTGGA CGATTCCCGG AAGTCAGTTC TGGCTGCAGA AGCGAGACTG A
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| Protein sequence | MQRISAAIAK RLLWWGAWAI IGVLVLNAAV GLWMQYQHLV FNDSTCEPVG LYQLRGSPYP
LHHGELVEVE IPGPAHHATV AEGLKYHWFP AGQPWIKEIA AVPGQTVRLT RSGVRVDGHT
LPNSRVDRWT PGHHHRIVHY PFGTYHLKRG QVWLYAPGNY AFDSSYYGPV PESHILQRVV
PWWTIPGSQF WLQKRD
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