| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0233 |
|---|
| Symbol | |
|---|
| ID | 6876183 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 218478 |
|---|
| End bp | 219050 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642788109 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002218698 |
|---|
| Protein GI | 198282377 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCGA ACTTCATCGT CATCTACGAC GCGTGCGTGC TCTACCCGGC ACCGTTGCGC
GACCTGCTGA TGCGCCTGGC GCTGACCGAT CTGTACCGGG CGCGTTGGAC GGACATGATC
CACGACGAGT GGACGCGTAA CGTTCTGAAG CAGCGGCCAG ACCTGAAGGC CGAAGACCTG
GAGCGGACGC GGTCGCTGAT GAACGCCCAC GTCCGCGACA GCCTGGTCAC CGGCTTCGGG
CATCTGATCC CGTCCGTCGA GTTGCCAGAC GCCGATGACC GGCATGTAGT TGCCGCCGCC
ATTCACGGCG GCGCCAGCCT GATCGTGACG TTCAACCTGA AGGATTTCCC GCCGGAACGG
CTCAAACCCT ACAACCTGAC CGCCCAGCAT CCAGACGACT TCATCTTCGA CCTACTGGAT
CTGCACGCAG CCCGCGTTTG CGAGGCGGCG GCCAACCATC GACGATCGCT GAAGAACCCG
CCCAAGACGG TTGACGAGTA CCTGGACACG CTGCTCAAGC AGGGACTGAC ACAGACCGTC
GGCCAGTTGC GGGAGTGGAA GGTAGCGATC TGA
|
|---|
| Protein sequence | MSSNFIVIYD ACVLYPAPLR DLLMRLALTD LYRARWTDMI HDEWTRNVLK QRPDLKAEDL
ERTRSLMNAH VRDSLVTGFG HLIPSVELPD ADDRHVVAAA IHGGASLIVT FNLKDFPPER
LKPYNLTAQH PDDFIFDLLD LHAARVCEAA ANHRRSLKNP PKTVDEYLDT LLKQGLTQTV
GQLREWKVAI
|
|---|
| |