Gene Lferr_0222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0222 
Symbol 
ID6876172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp208744 
End bp209589 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content52% 
IMG OID642788098 
ProductTnsA endonuclease 
Protein accessionYP_002218687 
Protein GI198282366 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.262078 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAAG GTTCTCGTAG ATCCGAGTCA GGAGCCATTG CGCGCCGTCT GAAAGAAGGA 
CGTGGCCAAG GCAGTGAGAA AAGCTATAAA CCGTGGCTCA CCGTGCGCGA CGTACCTTCT
CGGGGCTTGT CTGTCCGTAT AAAAGGCCGA AAAACGGGCC GTGTGCACCA CTTGCTCTCC
CAGTTGGAGT TGAGCTACTT CCTCATGCTG GATGATATAC GAGCCGGTTG TGTTACGGAC
ATTCGCGAGC AATTTCCTTT GACCCCCATC GAGACGACGC TTGAGATCGC GGATATGTTG
AGCATCCGTC ACCCCAAAGA TCCTAAAACC GGGGAGCCTA TCGTGATGAC AACCGACTTT
CTGGTCATTG TCACGTCTGC CGACGGAGAG CGGCGATTGG CTCGCACGCT GAAGCCATCA
GCCGATCTTG GTTCTCCGCG AGTCATTGAA AAATTTGAAA TTGAGCGGAT ATATTGGGAG
ACTCAGGGAG TAGACTGGGG CATCGTTACC GAACGCGAAA TACCTCAATC ATTGGTGGGG
AACTTAAGAA GCCTTCAGGG TTGTTGGGAT ACAGACAATC TACCAGCGGT TGCAGTACCC
CAAATAGAAC GGATTGAGTC AGAACTCCAC AGAGCATTAT CCGATAAGTC GATACCACTA
TTCCAAGCGG CGTTAGATTG TGATGGGCGG TTAGGTTTTG AAAATGGCAC CAGTCTGGCA
GTGGCTAAAT ATCTGATAGC TACGAGGCGC TGGGATATCG ACCTGCATCA ACCGATCAAG
ACTGAGGAAA ACCTACATAT TCTCGTACGC GGGCACGGGT CAACGGGAAT GGCTCCGGAG
GGATAG
 
Protein sequence
MSKGSRRSES GAIARRLKEG RGQGSEKSYK PWLTVRDVPS RGLSVRIKGR KTGRVHHLLS 
QLELSYFLML DDIRAGCVTD IREQFPLTPI ETTLEIADML SIRHPKDPKT GEPIVMTTDF
LVIVTSADGE RRLARTLKPS ADLGSPRVIE KFEIERIYWE TQGVDWGIVT EREIPQSLVG
NLRSLQGCWD TDNLPAVAVP QIERIESELH RALSDKSIPL FQAALDCDGR LGFENGTSLA
VAKYLIATRR WDIDLHQPIK TEENLHILVR GHGSTGMAPE G